Detailed information NTG0177078

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: IEC338SC_RS01480
• Genome accession: NZ_CP015145
• Coordinates: 313938..314996 (+)
• Length: 352 a.a.
• NCBI ID: WP_063097768.1
• Uniprot ID: A0AB33B8R1
• Organism: Acinetobacter pittii strain IEC338SC
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 308938..319996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IEC338SC_RS01465 (IEC338SC_0294)	-	310040..310372 (+)	333	WP_002116981.1	hypothetical protein	-
IEC338SC_RS01470 (IEC338SC_0295)	rrmA	310375..311199 (+)	825	WP_082188412.1	putative RNA methyltransferase	-
IEC338SC_RS01475 (IEC338SC_0296)	ponA	311215..313776 (-)	2562	WP_063097767.1	penicillin-binding protein PBP1a	-
IEC338SC_RS01480 (IEC338SC_0297)	pilM	313938..314996 (+)	1059	WP_063097768.1	pilus assembly protein PilM	Machinery gene
IEC338SC_RS01485 (IEC338SC_0298)	pilN	314996..315637 (+)	642	WP_063097769.1	PilN domain-containing protein	Machinery gene
IEC338SC_RS01490 (IEC338SC_0299)	pilO	315634..316386 (+)	753	WP_063097770.1	type 4a pilus biogenesis protein PilO	Machinery gene
IEC338SC_RS01495 (IEC338SC_0300)	pilP	316397..316924 (+)	528	WP_002116864.1	pilus assembly protein PilP	Machinery gene
IEC338SC_RS01500 (IEC338SC_0301)	pilQ	316987..319113 (+)	2127	WP_063097771.1	type IV pilus secretin PilQ family protein	Machinery gene
IEC338SC_RS01505 (IEC338SC_0302)	aroK	319125..319694 (+)	570	WP_063097772.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39096.70 Da
• Isoelectric Point: 4.4657

>NTDB_id=177078 IEC338SC_RS01480 WP_063097768.1 313938..314996(+) (pilM) [Acinetobacter pittii strain IEC338SC]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEILEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDIQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=177078 IEC338SC_RS01480 WP_063097768.1 313938..314996(+) (pilM) [Acinetobacter pittii strain IEC338SC]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAATACTGGAACTA
GTTGATTTAACACCTAAGCTTGCTGATGTTGAAAGTTATGCTGTTGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGTGGCAAACAGCTTACTTTGGAAATTCAAAGCCGTTATGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTCTAGATGCTGTAGT
TCAGCAAGCGGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GTAATGCCAACATTCCAGGGCTTGCTAAATTATTGCAACAAAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACATTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	95.739	100	0.957
comM	Acinetobacter nosocomialis M2	95.739	100	0.957
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42