Detailed information NTG0175865

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: BTV16_RS00765
• Genome accession: NZ_CP018804
• Coordinates: 140712..141356 (-)
• Length: 214 a.a.
• NCBI ID: WP_011608291.1
• Uniprot ID: -
• Organism: Histophilus somni strain USDA-ARS-USMARC-63368
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 135712..146356

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTV16_RS00735 (BTV16_00735)	yidD	136030..136290 (-)	261	WP_011608286.1	membrane protein insertion efficiency factor YidD	-
BTV16_RS00740 (BTV16_00740)	rnpA	136254..136613 (-)	360	WP_011608287.1	ribonuclease P protein component	-
BTV16_RS00745 (BTV16_00745)	rpmH	136628..136762 (-)	135	WP_007241546.1	50S ribosomal protein L34	-
BTV16_RS00750 (BTV16_00750)	dnaA	137105..138463 (+)	1359	WP_011608288.1	chromosomal replication initiator protein DnaA	-
BTV16_RS00755 (BTV16_00755)	dnaN	138475..139575 (+)	1101	WP_075293536.1	DNA polymerase III subunit beta	-
BTV16_RS00760 (BTV16_00760)	recF	139579..140655 (+)	1077	WP_075293535.1	DNA replication/repair protein RecF	-
BTV16_RS00765 (BTV16_00765)	crp	140712..141356 (-)	645	WP_011608291.1	cAMP-activated global transcriptional regulator CRP	Regulator
BTV16_RS00770 (BTV16_00770)	-	141369..141593 (-)	225	WP_012341336.1	YheU family protein	-
BTV16_RS00775 (BTV16_00775)	slmA	141628..142287 (-)	660	WP_011608293.1	nucleoid occlusion factor SlmA	-
BTV16_RS00780 (BTV16_00780)	dut	142287..142742 (-)	456	WP_011608294.1	dUTP diphosphatase	-
BTV16_RS00785 (BTV16_00785)	coaBC	142739..143965 (-)	1227	WP_075293534.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
BTV16_RS00790 (BTV16_00790)	radC	144138..144806 (+)	669	WP_011608296.1	RadC family protein	Machinery gene
BTV16_RS00795 (BTV16_00795)	rpmB	145027..145263 (+)	237	WP_011608297.1	50S ribosomal protein L28	-
BTV16_RS00800 (BTV16_00800)	rpmG	145275..145445 (+)	171	WP_005542835.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24029.75 Da
• Isoelectric Point: 7.4775

>NTDB_id=175865 BTV16_RS00765 WP_011608291.1 140712..141356(-) (crp) [Histophilus somni strain USDA-ARS-USMARC-63368]
MLEQQGQSAPSMDPTLEWFLSHCHIHKYSAKSSLIHAGEKAETLYYLIRGSVAVMVKDEEGKEMILTYLSQGDFFGEAGL
FDETQPRSAWVKAKSSCEIAEISYKKFRQLIQVNPEILMYLAGQLAHRLQNTSKQVSNLAFLDVTGRIAQTLLNLAKMPD
AMTHPDGMQIKITRQEIGQMVGCSRETVGRILKMLEDQHLISAHGKTIVVYGTR

Nucleotide

• Length: 645 bp

>NTDB_id=175865 BTV16_RS00765 WP_011608291.1 140712..141356(-) (crp) [Histophilus somni strain USDA-ARS-USMARC-63368]
ATGTTAGAACAACAAGGACAATCAGCACCATCGATGGATCCGACGTTAGAGTGGTTCCTATCTCATTGTCACATTCATAA
ATACTCAGCAAAAAGCTCCCTCATTCATGCTGGAGAAAAGGCGGAAACCCTTTATTATTTAATTAGAGGGTCTGTTGCCG
TGATGGTAAAAGATGAGGAAGGTAAAGAAATGATTTTGACTTATTTAAGTCAAGGTGATTTTTTTGGCGAAGCTGGTTTA
TTTGATGAAACACAGCCTCGTTCGGCTTGGGTTAAAGCTAAAAGCTCATGTGAAATTGCAGAAATTTCTTATAAAAAATT
TCGCCAATTAATTCAAGTTAATCCAGAAATTTTAATGTATTTAGCCGGTCAATTAGCTCATCGTTTACAAAATACTTCAA
AGCAGGTAAGCAATTTGGCATTTTTAGATGTGACAGGTCGTATCGCTCAAACCTTGTTAAATTTAGCTAAGATGCCTGAT
GCAATGACTCATCCGGACGGTATGCAAATTAAAATTACTCGTCAGGAAATAGGACAAATGGTAGGTTGCTCACGAGAAAC
TGTTGGGCGTATTTTGAAAATGTTAGAAGATCAGCATTTAATTTCAGCACATGGCAAAACTATTGTTGTGTATGGTACAA
GATAA

Domains

Predicted by InterProScan.

• Crp-like helix-turn-helix domain (HTH_Crp_2) (146-210)

• Cyclic nucleotide-binding domain (cNMP_binding) (27-113)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Vibrio cholerae strain A1552	81.463	95.794	0.78
crp	Haemophilus influenzae Rd KW20	78.846	97.196	0.766
crp	Acinetobacter baumannii D1279779	44.221	92.991	0.411