Detailed information NTG0173634

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ASQ50_RS15180
• Genome accession: NZ_CP014754
• Coordinates: 3303232..3304296 (+)
• Length: 354 a.a.
• NCBI ID: WP_058090082.1
• Uniprot ID: A0A142FTW4
• Organism: Marinobacter sp. LQ44
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3298232..3309296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASQ50_RS15165 (ASQ50_15160)	rpmE	3298669..3298890 (+)	222	WP_058090079.1	50S ribosomal protein L31	-
ASQ50_RS15170 (ASQ50_15165)	-	3299107..3300372 (+)	1266	WP_058090080.1	malic enzyme-like NAD(P)-binding protein	-
ASQ50_RS15175 (ASQ50_15170)	-	3300465..3302993 (-)	2529	WP_058090081.1	penicillin-binding protein 1A	-
ASQ50_RS15180 (ASQ50_15175)	pilM	3303232..3304296 (+)	1065	WP_058090082.1	pilus assembly protein PilM	Machinery gene
ASQ50_RS15185 (ASQ50_15180)	-	3304296..3304859 (+)	564	WP_058090083.1	PilN domain-containing protein	-
ASQ50_RS15190 (ASQ50_15185)	-	3304859..3305470 (+)	612	WP_058090084.1	type 4a pilus biogenesis protein PilO	-
ASQ50_RS15195 (ASQ50_15190)	-	3305473..3306015 (+)	543	WP_058090085.1	pilus assembly protein PilP	-
ASQ50_RS15200 (ASQ50_15195)	pilQ	3306085..3308139 (+)	2055	WP_227513186.1	type IV pilus secretin PilQ	Machinery gene
ASQ50_RS15205 (ASQ50_15200)	aroK	3308263..3308847 (+)	585	WP_058090087.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38062.18 Da
• Isoelectric Point: 4.1938

>NTDB_id=173634 ASQ50_RS15180 WP_058090082.1 3303232..3304296(+) (pilM) [Marinobacter sp. LQ44]
MFGLLGKKSSAVLGVDVSSSSVKLLELSRHGDRYKVESYAVEPLPANAVVEKNITDVEAVGEVLKRVASKSRTGVKQVAV
AVSGSAVITKVIQMDGGLNEFEMEDQITLEADQYIPYPLDEVAIDFEVQGPSESNPDQVDVLLAACRKENVDIREDALEI
AGLTTKIVDVEAYALERAYKLIEPQLESQGEELVVAIVDIGATMTTLSVLAEGKTVYTREQIFGGKQLTEEIQRRYGLSL
EEAGLAKKQGGLPDDYDPEVLTPFREAVVQQVARALQFFFGASQYNAVDYVVLAGGTASIQGLTEMVEEKTGTPTLVANP
FADMAVGSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=173634 ASQ50_RS15180 WP_058090082.1 3303232..3304296(+) (pilM) [Marinobacter sp. LQ44]
GTGTTCGGATTGCTAGGAAAAAAATCCAGTGCAGTGCTGGGGGTGGATGTCAGCTCCAGCTCGGTCAAACTTCTGGAACT
GTCAAGGCATGGCGACCGTTACAAGGTTGAAAGCTATGCGGTTGAGCCGTTGCCGGCCAACGCAGTTGTCGAGAAAAACA
TCACTGATGTAGAAGCGGTGGGTGAGGTGCTCAAGCGAGTCGCCTCCAAATCCCGTACCGGCGTCAAGCAGGTGGCCGTG
GCCGTATCAGGTTCTGCGGTTATCACCAAGGTTATCCAAATGGATGGCGGCCTCAACGAATTCGAGATGGAAGACCAGAT
CACCCTTGAGGCCGATCAGTACATCCCGTATCCGTTGGATGAAGTAGCCATCGACTTTGAGGTGCAGGGGCCGTCTGAAT
CGAATCCGGACCAGGTCGACGTGTTGCTGGCCGCGTGCAGAAAAGAGAACGTGGATATCCGTGAGGACGCTCTCGAGATT
GCCGGCCTGACCACCAAGATTGTGGATGTCGAAGCCTACGCGCTGGAAAGGGCATACAAGTTGATTGAGCCCCAGCTTGA
ATCCCAGGGCGAAGAGCTGGTGGTTGCCATCGTCGATATCGGCGCAACCATGACCACCCTGAGCGTGCTGGCCGAGGGCA
AGACGGTTTATACCCGTGAGCAGATTTTCGGTGGTAAGCAACTGACTGAGGAGATTCAGCGTCGCTACGGCCTGTCCCTT
GAGGAGGCCGGTCTCGCCAAGAAACAGGGTGGGCTTCCGGACGATTATGATCCGGAAGTGTTGACACCTTTCCGTGAGGC
AGTCGTGCAGCAAGTCGCGCGCGCCCTCCAGTTCTTCTTTGGTGCCAGCCAGTACAATGCCGTTGATTACGTCGTTCTTG
CCGGCGGCACGGCATCCATTCAGGGCCTGACCGAGATGGTCGAAGAGAAAACCGGTACGCCAACCCTGGTTGCGAATCCA
TTCGCCGACATGGCCGTGGGTTCCAGAGTGAATGCATCAGCCCTGAGCAATGATGCTCCATCGTTGATGATTGCCTGCGG
CCTGGCAATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A142FTW4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.39	100	0.534
comM	Acinetobacter nosocomialis M2	53.39	100	0.534
comM	Acinetobacter baylyi ADP1	51.412	100	0.514
pilM	Legionella pneumophila strain ERS1305867	45.48	100	0.455