Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BSR19_RS06250 Genome accession   NZ_CP018187
Coordinates   1270626..1272374 (-) Length   582 a.a.
NCBI ID   WP_156246800.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ICDC2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1265626..1277374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS06225 (BSR19_06300) dltD 1265999..1267267 (-) 1269 WP_156246798.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -
  BSR19_RS06230 (BSR19_06305) dltC 1267260..1267499 (-) 240 WP_002891149.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  BSR19_RS06235 (BSR19_06310) dltB 1267517..1268764 (-) 1248 WP_002891150.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  BSR19_RS06240 (BSR19_06315) dltA 1268761..1270311 (-) 1551 WP_156246799.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  BSR19_RS06245 (BSR19_06320) - 1270320..1270451 (-) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  BSR19_RS06250 (BSR19_06325) rcrQ 1270626..1272374 (-) 1749 WP_156246800.1 ABC transporter ATP-binding protein Regulator
  BSR19_RS06255 (BSR19_06330) - 1272364..1274103 (-) 1740 WP_156246801.1 ABC transporter ATP-binding protein -
  BSR19_RS06260 (BSR19_06335) - 1274134..1274745 (-) 612 WP_037620261.1 lysozyme family protein -
  BSR19_RS06265 (BSR19_06340) - 1274747..1275724 (-) 978 WP_156246802.1 nucleoid-associated protein -
  BSR19_RS06270 (BSR19_06345) glyA 1275730..1276980 (-) 1251 WP_002891158.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65422.94 Da        Isoelectric Point: 7.4533

>NTDB_id=173635 BSR19_RS06250 WP_156246800.1 1270626..1272374(-) (rcrQ) [Streptococcus salivarius strain ICDC2]
MKARNNKSTLKRLSRDILSQRYLFALATVGTIIQVALTVYLPILIGDAVDAVLKMNAVLLMSRLIWQMLVVILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAMPLSYLDRQGTGDMVSRVTTDSDQLNNGLLMVFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVARFIAKKSYQLYRNQTKWRGMQTQLIEESLTQEALVQSLNAQEQMVRSFKDVNGKYADYSQG
AIFYSSAVNPATRFVNSLIYALIAGVGAYRIMSGGAFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEEEITETGKAVLEEADVQGRFQFDHVQFGYLPNKPLIKDLSIEIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGNIL
LDGRPITDYTRESLRKQIGMVLQETWLEVGTIHDNIAYGNPEASREEVIAAAKAANADFFIKQLPQGYDTYLNDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
EQLMQAKGMYYRMQTAQKTQNS

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=173635 BSR19_RS06250 WP_156246800.1 1270626..1272374(-) (rcrQ) [Streptococcus salivarius strain ICDC2]
ATGAAGGCTAGAAATAATAAATCAACGCTTAAACGTTTAAGTAGAGATATCTTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTATTCAAGTTGCCTTAACGGTTTACTTACCTATCTTAATTGGTGATGCAGTGGACGCTGTTCTTA
AGATGAACGCCGTTCTATTGATGTCACGTTTAATTTGGCAGATGCTTGTAGTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGTTTGATTTATTCATATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATGCCTCTTAGTTACCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGTGTGACTACAGATAGCGATCAGTTAAACA
ACGGACTTCTCATGGTCTTTAACCAATTTTTCGTTGGGCTTTTGACTATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTCCTAGTCATGACGCCTCTGTCAATGCTTGTGGCACGTTTTATCGCAAAGAAGAGCTA
TCAACTCTATCGCAATCAAACTAAATGGCGAGGCATGCAGACTCAATTGATTGAGGAAAGTCTGACTCAAGAAGCTTTAG
TACAGAGTCTAAATGCTCAAGAACAGATGGTTAGGAGTTTTAAAGACGTCAATGGTAAGTATGCTGATTATTCACAGGGG
GCTATCTTTTATTCGTCAGCGGTTAACCCAGCTACACGTTTTGTCAATAGTCTGATCTATGCTCTTATTGCAGGTGTTGG
TGCCTATCGAATCATGTCGGGTGGTGCTTTCACAGTGGGACAATTGACTACCTTCCTAAATTATGTGACTCAGTATACGA
AACCTTTTAATGACATTTCGTCCGTACTTTCAGAACTTCAAAGTGCTTTGGCCTGTGCTGATCGCCTTTATATGATTTTG
GATGAAGAGGAAATAACAGAAACAGGTAAGGCGGTCTTGGAAGAAGCAGATGTGCAGGGACGTTTTCAATTTGATCATGT
CCAATTTGGCTATTTGCCTAATAAACCTCTTATCAAGGATTTGAGCATTGAGATCCCTGCCGCAAGTACTGTTGCCATTG
TTGGTCCTACAGGAGCGGGAAAATCTACCTTGATTAACCTGCTTATGCGTTTCTATGATTTGGACAAGGGGAACATTCTA
CTGGACGGTAGACCTATTACAGATTATACTCGTGAGAGTCTTCGGAAACAGATTGGGATGGTCTTGCAGGAAACTTGGCT
TGAGGTTGGCACTATTCATGATAATATTGCCTATGGTAATCCCGAAGCCAGTCGAGAAGAAGTTATAGCAGCAGCCAAGG
CTGCCAATGCAGATTTCTTTATTAAGCAGTTGCCTCAAGGCTATGACACCTACTTGAATGACGCGGGGCAATCCCTTTCT
CAGGGACAACGTCAGCTTTTGACCATTGCTCGCATATTTGTCAATGTGCCTAAAATCTTAATCTTGGATGAAGCCACTTC
TAGTATCGATACTCGTACAGAGCTTCTCATTCAAGAGGCCTTCGCTAAATTAATGAAAGGTCGAACAAGTTTCATCATTG
CCCATCGATTGTCTACCATCGAAAATGCGGACCTTATTTTGGTCATGAATAATGGAGATATCGTTGAACACGGAACCCAT
GAACAACTGATGCAGGCTAAGGGAATGTACTATCGTATGCAGACGGCCCAAAAGACACAAAATAGTTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.737

100

0.39

Multiple sequence alignment