Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   A0O21_RS09630 Genome accession   NZ_CP014699
Coordinates   2086400..2087527 (+) Length   375 a.a.
NCBI ID   WP_418346444.1    Uniprot ID   -
Organism   Streptococcus pantholopis strain TA 26     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2081400..2092527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0O21_RS09605 (A0O21_09605) - 2082279..2084873 (+) 2595 WP_418346443.1 YfhO family protein -
  A0O21_RS09625 (A0O21_09625) rlmH 2085651..2086130 (-) 480 WP_067064661.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  A0O21_RS09630 (A0O21_09630) htrA 2086400..2087527 (+) 1128 WP_418346444.1 S1C family serine protease Regulator
  A0O21_RS09635 (A0O21_09635) spo0J 2087656..2088423 (+) 768 WP_067064665.1 ParB/RepB/Spo0J family partition protein Regulator
  A0O21_RS09640 (A0O21_09640) dnaA 2088627..2089985 (+) 1359 WP_067064667.1 chromosomal replication initiator protein DnaA -
  A0O21_RS09645 (A0O21_09645) dnaN 2090138..2091271 (+) 1134 WP_067064668.1 DNA polymerase III subunit beta -
  A0O21_RS09650 (A0O21_09650) - 2091315..2092199 (+) 885 WP_067064670.1 diacylglycerol/lipid kinase family protein -
  A0O21_RS09655 (A0O21_09655) - 2092268..2092474 (+) 207 WP_067064672.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 375 a.a.        Molecular weight: 39168.08 Da        Isoelectric Point: 3.9974

>NTDB_id=173378 A0O21_RS09630 WP_418346444.1 2086400..2087527(+) (htrA) [Streptococcus pantholopis strain TA 26]
MGGILGATVTNYLNNHPENTTTKTSNVTYNNTTDTTEAVKTIQNAVVSVVNYQKASSSDMYSDIFGGDSSSASDSDSDLQ
VASQGSGVIYKKEGDSAYVVTNNHVIDGAEQIEILLADGTKVVGKLVGADTYSDLAVVQIPSENVKTVAEFADSSKINVG
EIAIAIGSPLGTDYANSVTQGIVSSLSRTVTLTNNNGETISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSN
SESVEGMGFAIPSNDVVKIINQLEENGEVVRPALGISMANLSDLSTSVINKLNIPESVTNGIVVGSVQSDMPASGKLEQY
DVITEIDGQEVTSTSDLQSILYDHEIGDSVKVTFYRGNDKKTVTIDLTKTTQDLS

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=173378 A0O21_RS09630 WP_418346444.1 2086400..2087527(+) (htrA) [Streptococcus pantholopis strain TA 26]
ATTGGTGGAATTTTAGGAGCAACTGTTACAAATTATCTCAATAATCACCCGGAAAACACTACAACAAAAACAAGCAATGT
GACTTACAATAATACTACTGACACAACAGAGGCAGTTAAAACAATCCAAAATGCTGTGGTTTCTGTCGTTAACTACCAAA
AAGCATCTTCTTCAGATATGTACAGTGATATATTTGGCGGAGACAGCAGCTCAGCATCAGACAGTGATTCAGATTTGCAA
GTTGCCAGTCAAGGGTCTGGTGTTATTTATAAAAAAGAAGGAGATTCTGCTTACGTTGTTACCAATAATCACGTTATTGA
CGGAGCTGAGCAGATTGAAATTCTTTTGGCTGATGGAACAAAAGTGGTTGGAAAACTAGTTGGTGCAGATACTTACTCCG
ATTTAGCTGTTGTCCAAATCCCATCTGAAAACGTAAAAACTGTAGCCGAATTTGCTGACTCTTCTAAAATTAATGTCGGA
GAAATTGCCATTGCTATTGGAAGCCCATTAGGTACAGATTATGCCAATTCTGTTACCCAAGGAATTGTGTCCAGTCTCAG
CCGTACTGTAACACTTACAAACAATAACGGTGAAACAATTTCGACAAATGCTATTCAGACAGATGCAGCAATTAATCCTG
GTAATTCCGGTGGTGCTTTGATTAATATTGAAGGACAGGTTATCGGTATCAATTCAAGCAAGATCTCTTCAACATCAAAC
AGTGAATCTGTAGAAGGGATGGGATTTGCTATTCCTTCCAATGATGTTGTAAAAATTATCAATCAACTTGAAGAAAACGG
TGAAGTTGTTCGTCCGGCTTTGGGTATTTCTATGGCTAATCTAAGTGATTTATCAACTAGTGTTATTAATAAGCTGAATA
TTCCTGAAAGTGTAACAAACGGCATTGTGGTTGGTTCTGTACAATCTGACATGCCGGCCAGCGGTAAATTAGAGCAGTAC
GATGTTATCACTGAAATTGACGGACAAGAAGTTACTTCTACCAGTGATCTTCAAAGTATTCTTTACGATCATGAGATTGG
TGATTCTGTCAAAGTAACCTTCTATCGCGGAAACGATAAGAAGACTGTAACAATTGACCTGACAAAGACCACTCAGGATT
TGTCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

67.196

100

0.677

  htrA Streptococcus gordonii str. Challis substr. CH1

58.225

100

0.595

  htrA Streptococcus mitis NCTC 12261

57.784

100

0.584

  htrA Streptococcus pneumoniae TIGR4

60.519

92.533

0.56

  htrA Streptococcus pneumoniae Rx1

60.519

92.533

0.56

  htrA Streptococcus pneumoniae D39

60.519

92.533

0.56

  htrA Streptococcus pneumoniae R6

60.519

92.533

0.56


Multiple sequence alignment