Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   A0O21_RS09400 Genome accession   NZ_CP014699
Coordinates   2041521..2041808 (+) Length   95 a.a.
NCBI ID   WP_067065288.1    Uniprot ID   A0A172QAP1
Organism   Streptococcus pantholopis strain TA 26     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2036521..2046808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0O21_RS09380 (A0O21_09380) - 2037563..2038540 (+) 978 WP_067064566.1 nucleoid-associated protein -
  A0O21_RS09385 (A0O21_09385) - 2038533..2039816 (+) 1284 WP_067064568.1 hypothetical protein -
  A0O21_RS09390 (A0O21_09390) - 2039813..2041030 (+) 1218 WP_067064570.1 restriction endonuclease subunit S -
  A0O21_RS09395 (A0O21_09395) - 2041162..2041521 (+) 360 WP_067064572.1 type II toxin-antitoxin system RelE/ParE family toxin -
  A0O21_RS09400 (A0O21_09400) HI0659 2041521..2041808 (+) 288 WP_067065288.1 helix-turn-helix domain-containing protein Machinery gene
  A0O21_RS09405 (A0O21_09405) - 2041841..2042809 (+) 969 WP_067064575.1 Fic family protein -
  A0O21_RS09410 (A0O21_09410) - 2042898..2044499 (+) 1602 WP_067064577.1 type I restriction-modification system subunit M -
  A0O21_RS09415 (A0O21_09415) - 2044568..2045608 (+) 1041 WP_067064580.1 alpha/beta fold hydrolase -
  A0O21_RS09420 (A0O21_09420) - 2045648..2046013 (-) 366 WP_067064583.1 MerR family transcriptional regulator -

Sequence


Protein


Download         Length: 95 a.a.        Molecular weight: 10522.09 Da        Isoelectric Point: 4.8535

>NTDB_id=173377 A0O21_RS09400 WP_067065288.1 2041521..2041808(+) (HI0659) [Streptococcus pantholopis strain TA 26]
MKNTAIGSSWQEVQQDLFTAEERRESDLRVAVMLELIKARQEQGISQKKLEELSGVSQPVIARMESGKTSPQLDTVLKVL
ASLGKTLAVVPLEQE

Nucleotide


Download         Length: 288 bp        

>NTDB_id=173377 A0O21_RS09400 WP_067065288.1 2041521..2041808(+) (HI0659) [Streptococcus pantholopis strain TA 26]
ATGAAGAATACAGCTATCGGAAGTTCTTGGCAAGAGGTTCAACAAGACCTCTTTACGGCAGAAGAAAGACGAGAAAGCGA
CTTGAGAGTGGCTGTGATGCTAGAGCTAATCAAGGCCCGTCAAGAACAGGGCATCAGCCAAAAGAAACTAGAAGAACTCA
GCGGCGTTAGCCAGCCTGTCATTGCTAGGATGGAGTCTGGAAAGACGAGTCCACAGCTGGATACGGTCTTAAAAGTCCTT
GCCAGTCTTGGAAAAACATTAGCTGTCGTCCCTTTGGAACAAGAGTAA

Domains


Predicted by InterproScan.

(37-88)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A172QAP1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.538

95.789

0.589


Multiple sequence alignment