Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   A0O21_RS08945 Genome accession   NZ_CP014699
Coordinates   1934141..1934851 (+) Length   236 a.a.
NCBI ID   WP_067064417.1    Uniprot ID   A0A172Q9H7
Organism   Streptococcus pantholopis strain TA 26     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1929141..1939851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0O21_RS08935 (A0O21_08935) treC 1930037..1931668 (-) 1632 WP_067064413.1 alpha,alpha-phosphotrehalase -
  A0O21_RS08940 (A0O21_08940) treP 1931824..1933788 (-) 1965 WP_067064415.1 PTS system trehalose-specific EIIBC component -
  A0O21_RS08945 (A0O21_08945) treR 1934141..1934851 (+) 711 WP_067064417.1 trehalose operon repressor Regulator
  A0O21_RS08950 (A0O21_08950) - 1934871..1936340 (-) 1470 WP_067064419.1 sensor histidine kinase -
  A0O21_RS08955 (A0O21_08955) - 1936350..1937042 (-) 693 WP_067064421.1 response regulator transcription factor -
  A0O21_RS08960 (A0O21_08960) - 1937431..1938219 (-) 789 WP_067064423.1 lantibiotic immunity ABC transporter MutG family permease subunit -
  A0O21_RS08965 (A0O21_08965) - 1938216..1938980 (-) 765 WP_067064425.1 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit -
  A0O21_RS08970 (A0O21_08970) - 1938977..1939678 (-) 702 WP_067064427.1 lantibiotic protection ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27075.22 Da        Isoelectric Point: 9.7025

>NTDB_id=173374 A0O21_RS08945 WP_067064417.1 1934141..1934851(+) (treR) [Streptococcus pantholopis strain TA 26]
MKKYEQIYQQLEADILKGSYAIGDYLPSEAELAAAHSVSRDTIRKALALLAENGLIKKKHGSGSQIIKHEPINFPVSALT
SYQELVERLAINSRTNLIAIDKLIVDEKLALLTGFKRNSLVWRLIRQRIVDDVASILDIDYLSKTIVPEISRTAAAYSIY
HYLEKQLLLDIAYTKKEITIDQITDRDKLLLDIGSEHHVVSVKSKGYLRDGRQFQFTDSRHKLDKFRFVDYAQRKR

Nucleotide


Download         Length: 711 bp        

>NTDB_id=173374 A0O21_RS08945 WP_067064417.1 1934141..1934851(+) (treR) [Streptococcus pantholopis strain TA 26]
ATGAAAAAATACGAACAGATTTATCAGCAGCTGGAAGCTGACATTCTAAAAGGCTCTTATGCGATTGGCGACTATCTCCC
CAGCGAAGCCGAACTGGCTGCCGCGCATAGCGTCAGCCGTGATACCATCCGCAAAGCACTGGCACTTTTAGCTGAAAACG
GCTTAATCAAAAAAAAACACGGCTCAGGCTCGCAGATTATCAAGCATGAACCGATTAATTTTCCTGTCTCAGCGCTGACC
AGCTATCAAGAATTAGTCGAGCGATTAGCCATCAATTCCCGGACGAATCTGATTGCTATTGATAAACTGATTGTTGATGA
AAAACTCGCCCTTTTGACCGGTTTTAAGCGCAACAGTCTCGTTTGGCGCCTAATCCGCCAGCGTATTGTTGATGATGTCG
CTTCTATCTTAGATATTGATTATCTCAGCAAAACAATTGTCCCTGAAATCAGCCGAACAGCTGCTGCCTATTCTATCTAT
CACTATCTGGAAAAACAGCTCCTACTGGATATTGCCTATACAAAAAAAGAAATTACGATTGACCAGATTACTGACCGAGA
TAAGCTCTTGCTGGATATCGGCTCAGAACACCATGTCGTCTCCGTTAAGTCCAAAGGATACCTGAGAGACGGCCGACAAT
TCCAATTCACAGACAGCCGCCACAAATTGGATAAATTCCGTTTTGTCGACTACGCCCAGCGCAAACGATGA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(92-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A172Q9H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

64.831

100

0.648

Multiple sequence alignment