Detailed information NTG0173290

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: BSF20_RS17280
• Genome accession: NZ_CP018152
• Coordinates: 3392838..3394841 (-)
• Length: 667 a.a.
• NCBI ID: WP_044053237.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain LM2303
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3387838..3399841

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSF20_RS17230 (BSF20_16890)	sspO	3388284..3388430 (+)	147	WP_003153982.1	acid-soluble spore protein SspO	-
BSF20_RS17235 (BSF20_16895)	-	3388460..3388606 (+)	147	WP_003153984.1	small acid-soluble spore protein P	-
BSF20_RS17240 (BSF20_16900)	-	3388701..3389072 (+)	372	WP_024085355.1	Hsp20/alpha crystallin family protein	-
BSF20_RS17245 (BSF20_16905)	-	3389306..3389734 (+)	429	WP_024085354.1	DUF2621 domain-containing protein	-
BSF20_RS17250 (BSF20_16910)	-	3389762..3390253 (-)	492	WP_088005392.1	CcdC family protein	-
BSF20_RS17255 (BSF20_16915)	-	3390333..3390695 (-)	363	WP_007410327.1	response regulator	-
BSF20_RS17260 (BSF20_16920)	-	3390780..3391487 (-)	708	WP_088056486.1	cytochrome c biogenesis protein CcdA	-
BSF20_RS17265 (BSF20_16925)	-	3391689..3391862 (+)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-
BSF20_RS17270 (BSF20_16930)	-	3391936..3392154 (-)	219	WP_003153994.1	YneF family protein	-
BSF20_RS17275 (BSF20_16935)	sirA	3392240..3392686 (-)	447	WP_044053238.1	sporulation inhibitor of replication protein SirA	-
BSF20_RS17280 (BSF20_16940)	recP/tkt	3392838..3394841 (-)	2004	WP_044053237.1	transketolase	Machinery gene
BSF20_RS17285 (BSF20_16945)	-	3395008..3395241 (-)	234	WP_003153997.1	DUF896 domain-containing protein	-
BSF20_RS17290 (BSF20_16950)	-	3395310..3395960 (-)	651	WP_003153998.1	recombinase family protein	-
BSF20_RS17295 (BSF20_16955)	yneA	3395976..3396287 (-)	312	WP_003154001.1	cell division suppressor protein YneA	-
BSF20_RS17300 (BSF20_16960)	dinR/lexA	3396444..3397064 (+)	621	WP_003154004.1	transcriptional repressor LexA	Regulator
BSF20_RS17305 (BSF20_16965)	-	3397403..3397831 (-)	429	WP_003154006.1	hypothetical protein	-
BSF20_RS17310 (BSF20_16970)	-	3397973..3398422 (+)	450	WP_015388182.1	YndM family protein	-
BSF20_RS17315 (BSF20_16975)	-	3398450..3399280 (-)	831	WP_003154011.1	prohibitin family protein	-
BSF20_RS20365	-	3399267..3399416 (-)	150	WP_003154013.1	hypothetical protein	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72515.71 Da
• Isoelectric Point: 4.9484

>NTDB_id=173290 BSF20_RS17280 WP_044053237.1 3392838..3394841(-) (recP/tkt) [Bacillus amyloliquefaciens strain LM2303]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGLEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAVKEAGSKKEQEWNELFAAYKE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKVAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYTVSKAKTDSPAALLLATG
SEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVVDRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=173290 BSF20_RS17280 WP_044053237.1 3392838..3394841(-) (recP/tkt) [Bacillus amyloliquefaciens strain LM2303]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTATAGACGCAATTGAAAAAGCGAATTCCGGACA
TCCGGGCATGCCGATGGGAGCCGCTCCGATGGCATACACGCTGTGGACGAAATTTATGAATGTAAATCCGCAGAATCCGG
GCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCCACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGAAGACTTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGGCATAC
AGCCGGAGTAGACGCAACGACCGGGCCGCTTGGACAGGGGATTGCAATGGCAGTGGGAATGGCAATTGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTAATG
GAAGGCATTTCTTCCGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGATCGTATTATACGATTCTAATGA
CATTTCCTTAGACGGCGATTTAGACCGTTCTTTCTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTC
TTTATGTTGAGGACGGAAACAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTGATTGAAGTGAAAACCACGATCGGTTTCGGTTCTCCAAACCGCGCGGGCACATCCGGCGTTCACGGCGCTCCGTTAGG
ACTAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACGTTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACG
GGCATTTCAATCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATAAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGCATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGT
TTATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTACTGAACGGGATCGCCAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCAAAGACTAC
GCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATGGGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCT
CCGCGTATTCGGCGGCACATTCTTTGTATTCTCTGATTATTTAAGACCTGCCATTCGTCTGGCATCATTGATGGGACTCC
CTGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAAGACGGGCCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCATGGAAGGTTGCCGT
TCAAAGCCAAGATCATCCGACAGCTCTTGTATTGACACGTCAAAACCTGCCGACGATTGATCAGCAGGCTGAAGAAGCGT
ATGCGGGCGTGGAAAAAGGGGCTTATACCGTTTCCAAAGCAAAAACCGATTCACCGGCCGCTCTTCTTTTAGCGACAGGT
TCTGAAGTCGGACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTATCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTCGAAAAACAATCGGCCGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGATCG
AAATGGGTTCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGTGCTTCA
GCTCCGGGAGAAACAATTATGAAGGAATACGGGTTTACTGCAGAAAACGTAGTTGACCGCGTGAAAAAACTTCTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, C-terminal domain (Transketolase_C) (550-657)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	56.042	99.25	0.556