Detailed information NTG0173290

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: A0U95_RS14020
• Genome accession: NZ_CP014693
• Coordinates: 3261378..3262442 (-)
• Length: 354 a.a.
• NCBI ID: WP_003196973.1
• Uniprot ID: A0A0Q7AAJ5
• Organism: Pseudomonas brassicacearum strain L13-6-12
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3256378..3267442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0U95_RS13995 (A0U95_13970)	aroK	3257041..3257559 (-)	519	WP_003196983.1	shikimate kinase AroK	-
A0U95_RS14000 (A0U95_13975)	pilQ	3257564..3259654 (-)	2091	WP_013692093.1	type IV pilus secretin PilQ	Machinery gene
A0U95_RS14005 (A0U95_13980)	-	3259668..3260195 (-)	528	WP_003196979.1	pilus assembly protein PilP	-
A0U95_RS14010 (A0U95_13985)	pilO	3260192..3260815 (-)	624	WP_003196977.1	type 4a pilus biogenesis protein PilO	-
A0U95_RS14015 (A0U95_13990)	-	3260812..3261378 (-)	567	WP_003196975.1	PilN domain-containing protein	-
A0U95_RS14020 (A0U95_13995)	comM	3261378..3262442 (-)	1065	WP_003196973.1	pilus assembly protein PilM	Machinery gene
A0U95_RS14025 (A0U95_14000)	-	3262651..3265095 (+)	2445	WP_371916716.1	penicillin-binding protein 1A	-
A0U95_RS14030 (A0U95_14005)	-	3265341..3266609 (-)	1269	WP_003196970.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38084.64 Da
• Isoelectric Point: 4.9070

>NTDB_id=173290 A0U95_RS14020 WP_003196973.1 3261378..3262442(-) (comM) [Pseudomonas brassicacearum strain L13-6-12]
MLRLFNKKAHALLGIDISSTSVKLLELSRQGDRYRVESYAVEPLPANAVVEKNIAELEGVGQALSRLLAKAKTPLRSVAV
AVAGSAVITKTIEMDAGLSDDDMENQLKIEADQYIPYPLDEVAIDFEVMGVSPRSAERVEVLLAACRKENVEVREAALAL
AGLTARVVDVEAYALERAFGLLATQLAASQERLTVAVVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLTP
EQAGQAKKQGGLPDDYLSEVLQPFREALVQQVSRSLQFFFASGQYSAVDHILLAGGTASVAGLDRLIEQRLGTPTQVANP
FTNMALSSKVNAGALAGDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=173290 A0U95_RS14020 WP_003196973.1 3261378..3262442(-) (comM) [Pseudomonas brassicacearum strain L13-6-12]
GTGCTACGACTCTTCAATAAAAAAGCCCATGCGCTTCTGGGGATCGACATCAGTTCGACGTCGGTGAAGCTGCTGGAGTT
GAGCCGCCAGGGCGATCGATACCGCGTCGAGTCCTACGCGGTCGAACCGTTGCCAGCCAACGCTGTGGTCGAGAAGAACA
TCGCCGAGCTCGAAGGGGTGGGGCAGGCGTTGTCGCGCCTGTTGGCCAAGGCCAAGACGCCCTTGCGTAGCGTGGCGGTG
GCGGTGGCGGGTTCAGCGGTGATCACCAAGACCATCGAGATGGACGCCGGCCTGTCCGACGATGACATGGAAAACCAGCT
CAAGATCGAGGCCGATCAATACATCCCCTATCCCCTGGATGAGGTGGCCATCGATTTCGAAGTGATGGGTGTTTCGCCAC
GCAGTGCCGAGCGCGTCGAAGTGCTGCTGGCGGCGTGCCGCAAGGAAAACGTCGAGGTCCGCGAGGCCGCATTGGCGCTC
GCCGGGCTGACGGCCCGGGTGGTCGATGTGGAGGCTTATGCGCTGGAGCGTGCTTTTGGCCTGCTCGCCACGCAACTGGC
TGCCTCCCAGGAACGGCTGACTGTGGCGGTCGTCGATATCGGCGCCACCATGACCACCCTCAGCGTGCTGCACAACGGGC
GCATCATCTATACCCGCGAACAATTGTTCGGCGGCCGCCAACTGACCGAGGAGATCCAGCGCCGCTATGGCCTGACACCC
GAGCAGGCTGGCCAGGCAAAGAAGCAGGGTGGCCTGCCGGACGACTATCTCAGCGAAGTGCTGCAACCTTTTCGCGAGGC
TCTGGTACAGCAGGTCTCGCGGTCCTTGCAGTTCTTCTTCGCCTCGGGCCAGTACAGTGCGGTGGACCACATTCTGCTGG
CCGGGGGCACGGCTTCGGTCGCCGGCCTGGATCGGCTGATCGAGCAGCGCCTGGGCACGCCGACCCAGGTGGCCAACCCG
TTTACCAACATGGCCCTGAGCAGCAAGGTCAATGCCGGCGCCCTGGCCGGTGATGCGCCGGCACTGATGATTGCCTGTGG
GCTGGCCCTCAGGAGTTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A0Q7AAJ5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	54.802	100	0.548
pilM	Legionella pneumophila strain ERS1305867	47.458	100	0.475