Detailed information NTG0173253

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: BSF20_RS12635
• Genome accession: NZ_CP018152
• Coordinates: 2412226..2413230 (+)
• Length: 334 a.a.
• NCBI ID: WP_044053532.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain LM2303
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2407226..2418230

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSF20_RS12610 (BSF20_12360)	murC	2407960..2409258 (+)	1299	WP_044053533.1	UDP-N-acetylmuramate--L-alanine ligase	-
BSF20_RS12615 (BSF20_12365)	-	2409414..2409836 (+)	423	WP_003152378.1	DUF948 domain-containing protein	-
BSF20_RS12620 (BSF20_12370)	-	2409869..2410282 (+)	414	WP_003152380.1	YtxH domain-containing protein	-
BSF20_RS12625 (BSF20_12375)	ytxJ	2410308..2410634 (+)	327	WP_003152382.1	bacillithiol system redox-active protein YtxJ	-
BSF20_RS12630 (BSF20_12380)	-	2410870..2411946 (+)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
BSF20_RS12635 (BSF20_12385)	ccpA	2412226..2413230 (+)	1005	WP_044053532.1	catabolite control protein A	Regulator
BSF20_RS12640 (BSF20_12390)	motP	2413299..2414114 (+)	816	WP_003152386.1	flagellar motor protein MotP	-
BSF20_RS12645 (BSF20_12395)	motS	2414104..2414793 (+)	690	WP_003152387.1	flagellar motor protein MotS	-
BSF20_RS12650 (BSF20_12400)	-	2414803..2415969 (-)	1167	WP_032857321.1	acetoin utilization protein AcuC	-
BSF20_RS12655 (BSF20_12405)	-	2415966..2416610 (-)	645	WP_003152389.1	acetoin utilization AcuB family protein	-
BSF20_RS12660 (BSF20_12410)	-	2416635..2417267 (-)	633	WP_003152390.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36935.24 Da
• Isoelectric Point: 4.9206

>NTDB_id=173253 BSF20_RS12635 WP_044053532.1 2412226..2413230(+) (ccpA) [Bacillus amyloliquefaciens strain LM2303]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFAAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=173253 BSF20_RS12635 WP_044053532.1 2412226..2413230(+) (ccpA) [Bacillus amyloliquefaciens strain LM2303]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTACCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACAACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCGGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATCTTAAGCAACTCGGATCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTCGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCTGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATTGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGCAGCGGAAGGCGATTACACTTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	53.939	98.802	0.533
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.03	98.802	0.524
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.301	99.401	0.5