Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | VVCECT4999_RS01780 | Genome accession | NZ_CP014636 |
| Coordinates | 357606..358196 (+) | Length | 196 a.a. |
| NCBI ID | WP_011079354.1 | Uniprot ID | A0A3Q0L3M6 |
| Organism | Vibrio vulnificus strain CECT 4999 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 352606..363196
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VVCECT4999_RS01765 (VVCECT4999_01740) | - | 353373..355886 (-) | 2514 | WP_039449670.1 | penicillin-binding protein 1A | - |
| VVCECT4999_RS01770 (VVCECT4999_01745) | pilM | 356026..357033 (+) | 1008 | WP_017419656.1 | type IV pilus assembly protein PilM | Machinery gene |
| VVCECT4999_RS01775 (VVCECT4999_01750) | pilN | 357023..357613 (+) | 591 | WP_017419657.1 | PilN domain-containing protein | Machinery gene |
| VVCECT4999_RS01780 (VVCECT4999_01755) | pilO | 357606..358196 (+) | 591 | WP_011079354.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| VVCECT4999_RS01785 (VVCECT4999_01760) | pilP | 358186..358698 (+) | 513 | WP_038940290.1 | pilus assembly protein PilP | Machinery gene |
| VVCECT4999_RS01790 (VVCECT4999_01765) | pilQ | 358712..360490 (+) | 1779 | WP_039449673.1 | type IV pilus secretin PilQ | Machinery gene |
| VVCECT4999_RS01795 (VVCECT4999_01770) | aroK | 360692..361210 (+) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| VVCECT4999_RS01800 (VVCECT4999_01775) | aroB | 361243..362334 (+) | 1092 | WP_011079358.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22749.25 Da Isoelectric Point: 5.0836
>NTDB_id=172842 VVCECT4999_RS01780 WP_011079354.1 357606..358196(+) (pilO) [Vibrio vulnificus strain CECT 4999]
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
Nucleotide
Download Length: 591 bp
>NTDB_id=172842 VVCECT4999_RS01780 WP_011079354.1 357606..358196(+) (pilO) [Vibrio vulnificus strain CECT 4999]
ATGGCTAGTTGGCAAGATCTCGATATCGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGCTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCGGCATTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAGGAGTTGGCGACGATGTTAGCTTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATTGATTGGGGGGAGAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCTCGCCTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
ATGGCTAGTTGGCAAGATCTCGATATCGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGCTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCGGCATTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAGGAGTTGGCGACGATGTTAGCTTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATTGATTGGGGGGAGAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCTCGCCTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
73.016 |
96.429 |
0.704 |
| pilO | Vibrio cholerae strain A1552 |
67.347 |
100 |
0.673 |