Detailed information NTG0172839

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: VVCECT4999_RS01680
• Genome accession: NZ_CP014636
• Coordinates: 330287..331294 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain CECT 4999
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 325287..336294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVCECT4999_RS01650 (VVCECT4999_01625)	zapB	325425..325667 (-)	243	WP_017789752.1	cell division protein ZapB	-
VVCECT4999_RS01655 (VVCECT4999_01630)	rraA	325889..326401 (-)	513	WP_017419637.1	ribonuclease E activity regulator RraA	-
VVCECT4999_RS01660 (VVCECT4999_01635)	-	326477..327394 (-)	918	WP_038964434.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
VVCECT4999_RS01665 (VVCECT4999_01640)	hslU	327559..328890 (-)	1332	WP_039449657.1	HslU--HslV peptidase ATPase subunit	-
VVCECT4999_RS01670 (VVCECT4999_01645)	hslV	328918..329472 (-)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
VVCECT4999_RS01675 (VVCECT4999_01650)	-	329622..330179 (-)	558	WP_017419640.1	SPOR domain-containing protein	-
VVCECT4999_RS01680 (VVCECT4999_01655)	cytR	330287..331294 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
VVCECT4999_RS01685 (VVCECT4999_01660)	priA	331523..333727 (-)	2205	WP_039449658.1	primosomal protein N'	-
VVCECT4999_RS01690 (VVCECT4999_01665)	rpmE	334008..334229 (+)	222	WP_011079336.1	50S ribosomal protein L31	-
VVCECT4999_RS01695 (VVCECT4999_01670)	-	334508..335785 (+)	1278	WP_039449661.1	malic enzyme-like NAD(P)-binding protein	-
VVCECT4999_RS01700 (VVCECT4999_01675)	metJ	335872..336189 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=172839 VVCECT4999_RS01680 WP_011079334.1 330287..331294(-) (cytR) [Vibrio vulnificus strain CECT 4999]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=172839 VVCECT4999_RS01680 WP_011079334.1 330287..331294(-) (cytR) [Vibrio vulnificus strain CECT 4999]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAGCAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACTGACTTACCTTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGACCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCTGCCTTTGAAGCGGTGAACTACCTGACTCAACTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCCGGCATCACAATGAACCCCCAATATT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGATGCGCCAACCGCC
GTCTTCTGTCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAAGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAACCACGCTATG
AGATTGGTCGTCAAGCGATGCTAATGATGTTAGAGCTGCTGAAAGGGCACGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCACCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875