Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DSM2777_RS01030 | Genome accession | NZ_CP014608 |
| Coordinates | 187446..187991 (-) | Length | 181 a.a. |
| NCBI ID | WP_061552949.1 | Uniprot ID | A0AA91IPT0 |
| Organism | Obesumbacterium proteus strain DSM 2777 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 182446..192991
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSM2777_RS01000 (DSM2777_01000) | - | 182569..184198 (-) | 1630 | Protein_208 | PilN family type IVB pilus formation outer membrane protein | - |
| DSM2777_RS01005 (DSM2777_01005) | pilM | 184270..184707 (-) | 438 | WP_060435752.1 | type IV pilus biogenesis protein PilM | - |
| DSM2777_RS01010 (DSM2777_01010) | - | 184707..185957 (-) | 1251 | WP_061552946.1 | TcpQ domain-containing protein | - |
| DSM2777_RS01020 (DSM2777_01020) | - | 186192..186623 (-) | 432 | WP_047609022.1 | DUF29 domain-containing protein | - |
| DSM2777_RS01025 (DSM2777_01025) | - | 186723..187358 (-) | 636 | WP_061552948.1 | hypothetical protein | - |
| DSM2777_RS01030 (DSM2777_01030) | ssb | 187446..187991 (-) | 546 | WP_061552949.1 | single-stranded DNA-binding protein | Machinery gene |
| DSM2777_RS01035 (DSM2777_01035) | - | 188067..188567 (-) | 501 | WP_047609019.1 | STY4534 family ICE replication protein | - |
| DSM2777_RS01040 (DSM2777_01040) | - | 189193..191205 (-) | 2013 | WP_061552950.1 | DNA topoisomerase III | - |
| DSM2777_RS01045 (DSM2777_01045) | - | 191216..191956 (-) | 741 | WP_047609017.1 | PFL_4669 family integrating conjugative element protein | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 19739.02 Da Isoelectric Point: 6.2402
>NTDB_id=172611 DSM2777_RS01030 WP_061552949.1 187446..187991(-) (ssb) [Obesumbacterium proteus strain DSM 2777]
MSSRGVNKVILIGFLGQEPEVRYLPNGMAVTNISLATSESWRDKQSGEEKERTEWHRVVLFGKLAEIAGEYLHKGSQVYI
EGQLQTRKWTDNAGVERWTTEIVVKQQGTMQMLGSSNRTNASGSGQPANKQHSAAAPASGTPQSQSAPQSMGNEPPMDFD
DDIPFLGYGYGVCRGALYGIS
MSSRGVNKVILIGFLGQEPEVRYLPNGMAVTNISLATSESWRDKQSGEEKERTEWHRVVLFGKLAEIAGEYLHKGSQVYI
EGQLQTRKWTDNAGVERWTTEIVVKQQGTMQMLGSSNRTNASGSGQPANKQHSAAAPASGTPQSQSAPQSMGNEPPMDFD
DDIPFLGYGYGVCRGALYGIS
Nucleotide
Download Length: 546 bp
>NTDB_id=172611 DSM2777_RS01030 WP_061552949.1 187446..187991(-) (ssb) [Obesumbacterium proteus strain DSM 2777]
ATGTCCAGTCGCGGCGTAAACAAAGTTATCCTGATCGGTTTTTTAGGGCAGGAACCTGAAGTTCGTTATCTTCCAAACGG
TATGGCAGTGACGAACATTTCATTGGCCACGTCTGAATCCTGGCGTGATAAACAATCAGGCGAAGAGAAAGAGCGTACTG
AATGGCACCGAGTGGTGTTGTTTGGCAAGCTTGCTGAAATCGCCGGAGAATACCTGCATAAAGGTTCTCAGGTTTACATC
GAAGGCCAGTTGCAAACCCGTAAGTGGACTGACAATGCAGGGGTCGAACGCTGGACAACTGAAATCGTGGTCAAACAGCA
GGGCACCATGCAGATGCTGGGTAGCAGCAATCGCACCAACGCCAGTGGAAGTGGTCAGCCTGCAAATAAACAGCATTCTG
CTGCAGCGCCTGCGAGCGGGACACCTCAGTCACAGTCAGCGCCGCAGTCTATGGGCAATGAACCGCCGATGGATTTTGAT
GACGACATCCCGTTCCTTGGTTATGGATATGGAGTATGTCGCGGCGCGCTTTACGGTATTTCCTGA
ATGTCCAGTCGCGGCGTAAACAAAGTTATCCTGATCGGTTTTTTAGGGCAGGAACCTGAAGTTCGTTATCTTCCAAACGG
TATGGCAGTGACGAACATTTCATTGGCCACGTCTGAATCCTGGCGTGATAAACAATCAGGCGAAGAGAAAGAGCGTACTG
AATGGCACCGAGTGGTGTTGTTTGGCAAGCTTGCTGAAATCGCCGGAGAATACCTGCATAAAGGTTCTCAGGTTTACATC
GAAGGCCAGTTGCAAACCCGTAAGTGGACTGACAATGCAGGGGTCGAACGCTGGACAACTGAAATCGTGGTCAAACAGCA
GGGCACCATGCAGATGCTGGGTAGCAGCAATCGCACCAACGCCAGTGGAAGTGGTCAGCCTGCAAATAAACAGCATTCTG
CTGCAGCGCCTGCGAGCGGGACACCTCAGTCACAGTCAGCGCCGCAGTCTATGGGCAATGAACCGCCGATGGATTTTGAT
GACGACATCCCGTTCCTTGGTTATGGATATGGAGTATGTCGCGGCGCGCTTTACGGTATTTCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
60 |
100 |
0.613 |
| ssb | Glaesserella parasuis strain SC1401 |
46.154 |
100 |
0.464 |
| ssb | Neisseria meningitidis MC58 |
44.693 |
98.895 |
0.442 |
| ssb | Neisseria gonorrhoeae MS11 |
44.693 |
98.895 |
0.442 |