Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BAMY_RS08190 | Genome accession | NZ_CP017953 |
| Coordinates | 1592035..1592397 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain Y14 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1587035..1597397
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAMY_RS08160 (BAMY_07965) | flgD | 1587938..1588378 (+) | 441 | WP_003154247.1 | flagellar hook assembly protein FlgD | - |
| BAMY_RS08165 (BAMY_07970) | flgG | 1588403..1589179 (+) | 777 | WP_003154244.1 | flagellar basal body rod protein FlgG | - |
| BAMY_RS08170 (BAMY_07975) | - | 1589219..1589434 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| BAMY_RS08175 (BAMY_07980) | fliL | 1589431..1589850 (+) | 420 | WP_003154241.1 | flagellar basal body-associated protein FliL | - |
| BAMY_RS08180 (BAMY_07985) | fliM | 1589884..1590882 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| BAMY_RS08185 (BAMY_07990) | fliY | 1590872..1592008 (+) | 1137 | WP_003154239.1 | flagellar motor switch phosphatase FliY | - |
| BAMY_RS08190 (BAMY_07995) | pilH | 1592035..1592397 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| BAMY_RS08195 (BAMY_08000) | fliZ | 1592412..1593065 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| BAMY_RS08200 (BAMY_08005) | fliP | 1593058..1593723 (+) | 666 | WP_003154235.1 | flagellar type III secretion system pore protein FliP | - |
| BAMY_RS08205 (BAMY_08010) | fliQ | 1593738..1594007 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| BAMY_RS08210 (BAMY_08015) | fliR | 1594014..1594793 (+) | 780 | WP_003154233.1 | flagellar biosynthetic protein FliR | - |
| BAMY_RS08215 (BAMY_08020) | flhB | 1594793..1595872 (+) | 1080 | WP_003154232.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=172128 BAMY_RS08190 WP_003154238.1 1592035..1592397(+) (pilH) [Bacillus amyloliquefaciens strain Y14]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=172128 BAMY_RS08190 WP_003154238.1 1592035..1592397(+) (pilH) [Bacillus amyloliquefaciens strain Y14]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAGGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAGGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |