Detailed information NTG0171823

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AYJ52_RS03120
• Genome accession: NZ_CP014477
• Coordinates: 661366..661848 (-)
• Length: 160 a.a.
• NCBI ID: WP_017387038.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AP_882
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 656366..666848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AYJ52_RS03085 (AYJ52_03085)	-	656452..657483 (+)	1032	WP_017403268.1	lipase secretion chaperone	-
AYJ52_RS03090 (AYJ52_03090)	lip	657599..658540 (+)	942	WP_014207808.1	lipase family alpha/beta hydrolase	-
AYJ52_RS03095 (AYJ52_03095)	rplS	658591..658959 (-)	369	WP_002116654.1	50S ribosomal protein L19	-
AYJ52_RS03100 (AYJ52_03100)	trmD	659179..659934 (-)	756	WP_017387036.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AYJ52_RS03105 (AYJ52_03105)	rimM	659977..660525 (-)	549	WP_002116736.1	ribosome maturation factor RimM	-
AYJ52_RS03110 (AYJ52_03110)	rpsP	660545..660796 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
AYJ52_RS03115 (AYJ52_03115)	pilE	660944..661369 (-)	426	WP_017387037.1	type IV pilin protein	Machinery gene
AYJ52_RS03120 (AYJ52_03120)	pilY2	661366..661848 (-)	483	WP_017387038.1	type IV pilin protein	Machinery gene
AYJ52_RS03125 (AYJ52_03125)	pilY1	661859..665713 (-)	3855	WP_017403269.1	PilC/PilY family type IV pilus protein	Machinery gene
AYJ52_RS03130 (AYJ52_03130)	pilX	665725..666534 (-)	810	WP_005078460.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17535.81 Da
• Isoelectric Point: 8.4721

>NTDB_id=171823 AYJ52_RS03120 WP_017387038.1 661366..661848(-) (pilY2) [Acinetobacter pittii strain AP_882]
MNKYYILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=171823 AYJ52_RS03120 WP_017387038.1 661366..661848(-) (pilY2) [Acinetobacter pittii strain AP_882]
ATGAATAAATATTATATTCTGCGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCGACGGCTTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACCACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGCTGCCAAAGTT
TAACAGCTACAGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	95	100	0.95
comE	Acinetobacter baylyi ADP1	41.279	100	0.444