Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AYJ52_RS03115 | Genome accession | NZ_CP014477 |
| Coordinates | 660944..661369 (-) | Length | 141 a.a. |
| NCBI ID | WP_017387037.1 | Uniprot ID | A0A009HLI2 |
| Organism | Acinetobacter pittii strain AP_882 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 655944..666369
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYJ52_RS03085 (AYJ52_03085) | - | 656452..657483 (+) | 1032 | WP_017403268.1 | lipase secretion chaperone | - |
| AYJ52_RS03090 (AYJ52_03090) | lip | 657599..658540 (+) | 942 | WP_014207808.1 | lipase family alpha/beta hydrolase | - |
| AYJ52_RS03095 (AYJ52_03095) | rplS | 658591..658959 (-) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| AYJ52_RS03100 (AYJ52_03100) | trmD | 659179..659934 (-) | 756 | WP_017387036.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AYJ52_RS03105 (AYJ52_03105) | rimM | 659977..660525 (-) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| AYJ52_RS03110 (AYJ52_03110) | rpsP | 660545..660796 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AYJ52_RS03115 (AYJ52_03115) | pilE | 660944..661369 (-) | 426 | WP_017387037.1 | type IV pilin protein | Machinery gene |
| AYJ52_RS03120 (AYJ52_03120) | pilY2 | 661366..661848 (-) | 483 | WP_017387038.1 | type IV pilin protein | Machinery gene |
| AYJ52_RS03125 (AYJ52_03125) | pilY1 | 661859..665713 (-) | 3855 | WP_017403269.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15215.35 Da Isoelectric Point: 7.1292
>NTDB_id=171822 AYJ52_RS03115 WP_017387037.1 660944..661369(-) (pilE) [Acinetobacter pittii strain AP_882]
MKNGFTLIELMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATITSIYGSNVSPQQG
QALYNLAFSSITDSSWVLTATPIATSSQAGDGIICLNDQGQKFWAKGATDCALSATSNWLQ
MKNGFTLIELMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATITSIYGSNVSPQQG
QALYNLAFSSITDSSWVLTATPIATSSQAGDGIICLNDQGQKFWAKGATDCALSATSNWLQ
Nucleotide
Download Length: 426 bp
>NTDB_id=171822 AYJ52_RS03115 WP_017387037.1 660944..661369(-) (pilE) [Acinetobacter pittii strain AP_882]
ATGAAGAATGGTTTTACCTTAATAGAACTCATGATTGTAGTAGCAATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
GTATTTGCAGTATTTACGCAAAGGGCATCGTACAGCTGTTCAGTCTGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACGATTACTTCGATTTATGGTTCTAATGTCAGTCCTCAACAAGGC
CAAGCCTTATATAACTTAGCTTTTTCTAGCATAACTGATTCAAGCTGGGTGTTAACTGCTACACCTATTGCTACTAGTTC
TCAAGCTGGTGATGGGATCATTTGTCTTAATGATCAAGGGCAAAAATTCTGGGCAAAAGGTGCAACTGATTGTGCGTTAT
CTGCCACATCAAATTGGCTACAGTAA
ATGAAGAATGGTTTTACCTTAATAGAACTCATGATTGTAGTAGCAATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
GTATTTGCAGTATTTACGCAAAGGGCATCGTACAGCTGTTCAGTCTGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACGATTACTTCGATTTATGGTTCTAATGTCAGTCCTCAACAAGGC
CAAGCCTTATATAACTTAGCTTTTTCTAGCATAACTGATTCAAGCTGGGTGTTAACTGCTACACCTATTGCTACTAGTTC
TCAAGCTGGTGATGGGATCATTTGTCTTAATGATCAAGGGCAAAAATTCTGGGCAAAAGGTGCAACTGATTGTGCGTTAT
CTGCCACATCAAATTGGCTACAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
86.525 |
100 |
0.865 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |