Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   AYM29_RS10865 Genome accession   NZ_CP014420
Coordinates   2073767..2074810 (-) Length   347 a.a.
NCBI ID   WP_077467091.1    Uniprot ID   -
Organism   Staphylococcus aureus strain USA300-SUR16     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2068767..2079810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AYM29_RS10835 (AYM29_10560) - 2069185..2070441 (-) 1257 WP_001795438.1 aminopeptidase -
  AYM29_RS10840 (AYM29_10565) - 2070444..2070644 (-) 201 WP_000180461.1 DUF1128 family protein -
  AYM29_RS10845 (AYM29_10570) - 2070791..2071255 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  AYM29_RS10850 (AYM29_10575) - 2071262..2071537 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  AYM29_RS10855 (AYM29_10580) - 2071815..2073032 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  AYM29_RS10860 (AYM29_10585) vraR 2073148..2073777 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  AYM29_RS10865 (AYM29_10590) vraS 2073767..2074810 (-) 1044 WP_077467091.1 sensor histidine kinase Regulator
  AYM29_RS10870 (AYM29_10595) liaF 2074807..2075508 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  AYM29_RS10875 (AYM29_10600) - 2075523..2075909 (-) 387 WP_001110179.1 hypothetical protein -
  AYM29_RS10880 (AYM29_10605) map 2076126..2076884 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  AYM29_RS10885 (AYM29_10615) - 2077412..2078398 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  AYM29_RS10895 (AYM29_10620) - 2078829..2079242 (-) 414 WP_001549145.1 hypothetical protein -
  AYM29_RS10900 (AYM29_10625) - 2079271..2079381 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39991.47 Da        Isoelectric Point: 5.8527

>NTDB_id=171333 AYM29_RS10865 WP_077467091.1 2073767..2074810(-) (vraS) [Staphylococcus aureus strain USA300-SUR16]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMCERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=171333 AYM29_RS10865 WP_077467091.1 2073767..2074810(-) (vraS) [Staphylococcus aureus strain USA300-SUR16]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGTGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment