Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   AXE83_RS04815 Genome accession   NZ_CP014264
Coordinates   1019195..1020151 (+) Length   318 a.a.
NCBI ID   WP_060955632.1    Uniprot ID   A0A0X8JXZ5
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1014195..1025151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS04800 (AXE83_04800) smpB 1016404..1016871 (+) 468 WP_001051741.1 SsrA-binding protein SmpB -
  AXE83_RS04805 (AXE83_04805) tehB 1016886..1017746 (+) 861 WP_060955630.1 SAM-dependent methyltransferase TehB -
  AXE83_RS04810 (AXE83_04810) - 1017950..1019098 (+) 1149 WP_060955631.1 DUF1887 family protein -
  AXE83_RS04815 (AXE83_04815) coiA 1019195..1020151 (+) 957 WP_060955632.1 competence protein CoiA family protein Machinery gene
  AXE83_RS04820 (AXE83_04820) pepF 1020170..1021972 (+) 1803 WP_060955633.1 oligoendopeptidase F Regulator
  AXE83_RS04825 (AXE83_04825) - 1021978..1022691 (+) 714 WP_083500989.1 O-methyltransferase -
  AXE83_RS04830 (AXE83_04830) prsA 1022765..1023706 (+) 942 WP_060955634.1 peptidylprolyl isomerase PrsA -
  AXE83_RS04835 (AXE83_04835) - 1023768..1025024 (-) 1257 WP_060955506.1 ISL3 family transposase -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 38252.81 Da        Isoelectric Point: 8.8048

>NTDB_id=169996 AXE83_RS04815 WP_060955632.1 1019195..1020151(+) (coiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MFLARDENGDLISALEDEVKKQVYYCPACGTSVRLRKGKNVRAHFAHESLKSCDFYHENEGPEHLENKVALFNWAKKDAE
VEMEYPIPELKQIADIFINKQLALEIQCSPISCDLLRNRSNGYRSLGIQVLWLLGKKLWLRERLTKLQRDFLYFSNNMGF
HIWELDHKKQVLRLKYLLHQDLKGKLHYQVKEFSYGKGNLLEILRSPYQKQTLITFSVEQDIDICHYIQKQLYYQNPYWM
KQQAQAYLRGENLLNWKTQDWYPQVRPIEHGHFCQISQNLYDYYRNFQAYYELNPHNQQQKLYPPAFYQHYFSKNMVK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=169996 AXE83_RS04815 WP_060955632.1 1019195..1020151(+) (coiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGTTTTTAGCTAGAGATGAAAATGGGGATTTAATCAGCGCTTTAGAGGATGAAGTAAAGAAGCAAGTTTATTATTGTCC
GGCTTGTGGAACGAGTGTTCGCTTGAGGAAAGGAAAAAACGTGCGTGCACATTTCGCTCATGAAAGTTTAAAAAGTTGTG
ATTTTTATCATGAGAACGAAGGACCAGAACATTTAGAGAATAAGGTGGCACTTTTTAATTGGGCTAAGAAAGATGCTGAA
GTAGAAATGGAATATCCGATTCCTGAACTTAAGCAAATTGCAGATATCTTTATCAATAAACAACTAGCTCTAGAAATTCA
ATGCAGTCCCATTTCATGTGACCTTTTGAGGAACAGAAGCAATGGTTATCGAAGTTTGGGAATTCAAGTTCTTTGGCTAC
TAGGAAAAAAGCTCTGGTTAAGAGAGCGTCTAACTAAACTTCAGAGAGATTTTCTTTACTTCAGTAATAATATGGGCTTT
CATATTTGGGAGTTAGACCATAAAAAACAAGTTTTAAGACTTAAGTACCTCCTTCACCAAGATTTGAAAGGGAAACTCCA
TTATCAGGTCAAGGAATTTTCTTATGGCAAAGGAAATCTCCTAGAAATTTTACGTAGTCCTTATCAGAAACAAACTCTTA
TCACTTTTTCAGTTGAGCAAGACATAGATATTTGTCATTACATTCAAAAACAGCTCTATTATCAAAACCCCTATTGGATG
AAACAACAAGCTCAAGCTTACTTGAGAGGAGAAAACCTATTAAATTGGAAGACTCAGGACTGGTATCCCCAAGTAAGGCC
GATAGAACATGGTCATTTTTGTCAGATAAGTCAAAATCTATATGATTATTACCGCAACTTTCAGGCTTATTATGAACTGA
ATCCACATAATCAGCAACAAAAGCTCTATCCACCTGCCTTTTATCAGCATTATTTCTCGAAAAATATGGTAAAATAG

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(19-245)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8JXZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

65.723

100

0.657
  coiA Streptococcus pneumoniae Rx1

63.522

100

0.635
  coiA Streptococcus pneumoniae D39

63.522

100

0.635
  coiA Streptococcus pneumoniae R6

63.522

100

0.635
  coiA Streptococcus pneumoniae TIGR4

63.208

100

0.632
  coiA Lactococcus lactis subsp. cremoris KW2

40.683

100

0.412

Multiple sequence alignment