Detailed information    

insolico Bioinformatically predicted

Overview


Name   pepF   Type   Regulator
Locus tag   AXE83_RS04820 Genome accession   NZ_CP014264
Coordinates   1020170..1021972 (+) Length   600 a.a.
NCBI ID   WP_060955633.1    Uniprot ID   A0A0X8JY00
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context


Location: 1015170..1026972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS04800 (AXE83_04800) smpB 1016404..1016871 (+) 468 WP_001051741.1 SsrA-binding protein SmpB -
  AXE83_RS04805 (AXE83_04805) tehB 1016886..1017746 (+) 861 WP_060955630.1 SAM-dependent methyltransferase TehB -
  AXE83_RS04810 (AXE83_04810) - 1017950..1019098 (+) 1149 WP_060955631.1 DUF1887 family protein -
  AXE83_RS04815 (AXE83_04815) coiA 1019195..1020151 (+) 957 WP_060955632.1 competence protein CoiA family protein Machinery gene
  AXE83_RS04820 (AXE83_04820) pepF 1020170..1021972 (+) 1803 WP_060955633.1 oligoendopeptidase F Regulator
  AXE83_RS04825 (AXE83_04825) - 1021978..1022691 (+) 714 WP_083500989.1 O-methyltransferase -
  AXE83_RS04830 (AXE83_04830) prsA 1022765..1023706 (+) 942 WP_060955634.1 peptidylprolyl isomerase PrsA -
  AXE83_RS04835 (AXE83_04835) - 1023768..1025024 (-) 1257 WP_060955506.1 ISL3 family transposase -
  AXE83_RS04840 (AXE83_04840) - 1025401..1026612 (+) 1212 WP_060955635.1 FtsW/RodA/SpoVE family cell cycle protein -

Sequence


Protein


Download         Length: 600 a.a.        Molecular weight: 69796.66 Da        Isoelectric Point: 4.4979

>NTDB_id=169997 AXE83_RS04820 WP_060955633.1 1020170..1021972(+) (pepF) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MVLQRNEINEKDTWDLSTIFETDQKWEEELALLTEDTKQAASLEGHLLDSAESLLDITERYLDLSRRLEKLYVYAHMKND
QDTRVAKYQEYYAKAMTLYSQLDQVFSFYEPEFMAITEDQYQNFLAEEPKLQPYKHFFDKLLQNKDHVLSQREEELLAGA
GEIFGAASETFAILDNADIVFPYVQDEDGNEVQLSHGVYMRLVESKNREVRRGAYEALYATYEQYQHTYAKTLQTNVKVQ
NYRAKVRNYKSAREAALAANFVPESVYDNLVSAVRKHLPLLHRYLALRSKILGIPDLKMYDVYTPLSSVEYSFTYEEALK
KAEDALAVLGEDYLNRVKSAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLQEVQDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSEF
LNNLYADLNQEYYGLSKEDDPQIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
NIMRKAGVDMEKEDYLNDAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=169997 AXE83_RS04820 WP_060955633.1 1020170..1021972(+) (pepF) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGGTATTACAACGAAATGAAATCAATGAAAAAGATACATGGGATCTATCAACGATCTTTGAAACAGACCAAAAATGGGA
AGAAGAACTCGCCCTTTTAACAGAAGATACAAAACAAGCAGCTAGTCTTGAGGGTCATCTCTTGGACAGTGCAGAAAGCC
TTCTTGATATTACAGAGCGTTATCTGGACTTGAGTCGTCGTCTTGAAAAACTCTATGTCTATGCACATATGAAAAACGAC
CAGGATACACGAGTTGCTAAATATCAAGAATACTATGCAAAAGCCATGACTCTTTATAGTCAACTTGATCAAGTCTTCTC
TTTCTATGAGCCTGAATTTATGGCAATCACAGAAGACCAGTATCAAAACTTTCTAGCAGAAGAACCAAAACTCCAGCCTT
ATAAACACTTCTTTGATAAACTCTTGCAAAATAAGGACCATGTCCTTTCACAACGTGAAGAAGAGCTGCTTGCAGGTGCT
GGTGAAATCTTCGGTGCTGCTAGTGAAACCTTTGCTATTTTAGATAATGCAGATATCGTCTTTCCATATGTTCAAGATGA
AGATGGAAATGAAGTTCAATTATCACACGGCGTTTATATGCGCTTGGTAGAGTCTAAGAATCGTGAGGTTCGTCGTGGAG
CTTATGAAGCCCTCTATGCTACTTATGAGCAATACCAGCACACTTACGCTAAAACCTTGCAGACCAATGTTAAAGTGCAA
AACTATCGTGCTAAGGTTCGAAACTACAAGAGTGCGCGTGAAGCTGCTCTTGCGGCAAACTTTGTGCCAGAAAGTGTCTA
TGACAACTTAGTATCTGCTGTTCGTAAACACTTGCCGTTATTGCATCGTTATCTGGCTCTTCGCTCAAAAATCCTTGGTA
TTCCAGACCTCAAAATGTACGATGTCTATACACCATTGTCTTCAGTGGAATACAGCTTCACTTATGAAGAAGCCTTGAAG
AAAGCAGAAGATGCTTTGGCAGTTCTTGGTGAGGATTACTTGAACCGTGTTAAAAGTGCCTTCAGCGAACGCTGGATTGA
TGTGTATGAAAATCAAGGCAAGCGTTCAGGTGCATATTCTGGCGGTTCTTATGATACCAACGCCTTCATGCTCCTTAACT
GGCAAGATAACCTGGATAATCTTTTCACTCTTGTACATGAGACAGGTCATAGTATGCATTCTAGCTATACGCGTGAAACT
CAGCCTTATGTATACGGAGATTACTCAATCTTCTTGGCAGAAATTGCTTCAACTACTAATGAAAACATCCTGACAGAAAA
ATTATTGCAAGAAGTTCAAGACGATGCAACACGCTTTGCAATTCTCAACAACTTCCTAGATGGTTTCCGTGGAACAGTCT
TCCGCCAAACTCAATTTGCTGAATTTGAACATGCTATTCACCAAGCTGACCAAAATGGTGAAGTCTTGACAAGTGAGTTC
CTAAACAATCTCTATGCTGACTTGAACCAAGAATATTATGGTTTGAGCAAGGAAGACGATCCTCAAATCCAGTATGAGTG
GGCTCGAATTCCTCATTTCTACTATAACTACTATGTCTATCAATATTCAACAGGCTTTGCAGCAGCTTCAGCTTTGGCTG
AAAAGATTGTTCATGGTAGCCAAGAGGATCGTGATCGCTATATTGACTACCTCAAAGCAGGGAAGTCAGACTATCCACTC
AATATCATGCGTAAAGCGGGTGTTGATATGGAAAAAGAAGATTACCTCAACGATGCCTTTGCAGTCTTTGAACGCCGTTT
GGATGAGTTTGAAGCCCTTGTTGAAAAATTAGGATTGGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0X8JY00

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.282

99.333

0.668


Multiple sequence alignment