Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | AXF35_RS04825 | Genome accession | NZ_CP014255 |
| Coordinates | 1034657..1035256 (+) | Length | 199 a.a. |
| NCBI ID | WP_027221266.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pascullei strain F-4185 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1029657..1040256
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXF35_RS04810 (AXF35_11980) | - | 1031595..1032608 (-) | 1014 | WP_027221263.1 | hypothetical protein | - |
| AXF35_RS04815 (AXF35_11975) | pilM | 1033027..1034091 (+) | 1065 | WP_027221264.1 | pilus assembly protein PilM | Machinery gene |
| AXF35_RS04820 (AXF35_11970) | pilN | 1034095..1034643 (+) | 549 | WP_027221265.1 | PilN domain-containing protein | Machinery gene |
| AXF35_RS04825 (AXF35_11965) | pilO | 1034657..1035256 (+) | 600 | WP_027221266.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AXF35_RS04830 (AXF35_11960) | pilP | 1035253..1035837 (+) | 585 | WP_027221267.1 | pilus assembly protein PilP | Machinery gene |
| AXF35_RS04835 (AXF35_11955) | pilQ | 1035841..1037937 (+) | 2097 | WP_027221268.1 | type IV pilus secretin PilQ | Machinery gene |
| AXF35_RS04840 (AXF35_11950) | aroK | 1038380..1038907 (+) | 528 | WP_032828804.1 | shikimate kinase AroK | - |
| AXF35_RS04845 (AXF35_11945) | aroB | 1038894..1039997 (+) | 1104 | WP_027221270.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22441.13 Da Isoelectric Point: 5.3305
>NTDB_id=169814 AXF35_RS04825 WP_027221266.1 1034657..1035256(+) (pilO) [Legionella pneumophila subsp. pascullei strain F-4185]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=169814 AXF35_RS04825 WP_027221266.1 1034657..1035256(+) (pilO) [Legionella pneumophila subsp. pascullei strain F-4185]
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGAACCATGCTAAAACAACTCCCGGCAAAAAATGAAATGCCTGGGCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTTGCTGAAATGAACAGA
ATCGTGACTTTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACTGCTAAAATATACAGATATCGGGCACAATGA
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGAACCATGCTAAAACAACTCCCGGCAAAAAATGAAATGCCTGGGCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTTGCTGAAATGAACAGA
ATCGTGACTTTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACTGCTAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
97.487 |
100 |
0.975 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |