Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   AXE82_RS07405 Genome accession   NZ_CP014234
Coordinates   1683508..1685001 (-) Length   497 a.a.
NCBI ID   WP_062333134.1    Uniprot ID   A0A378QD09
Organism   Moraxella osloensis strain CCUG 350     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 1678508..1690001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE82_RS07385 (AXE82_07390) pstS 1679926..1680930 (-) 1005 WP_062333122.1 phosphate ABC transporter substrate-binding protein PstS -
  AXE82_RS07390 (AXE82_07395) phoU 1681276..1682046 (+) 771 WP_062333125.1 phosphate signaling complex protein PhoU -
  AXE82_RS07395 (AXE82_07400) - 1682187..1682921 (+) 735 WP_062333128.1 phosphoglycolate phosphatase -
  AXE82_RS07400 (AXE82_07405) - 1682908..1683468 (+) 561 WP_062333131.1 DUF4385 domain-containing protein -
  AXE82_RS07405 (AXE82_07410) comM 1683508..1685001 (-) 1494 WP_062333134.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  AXE82_RS07410 (AXE82_07415) hemN 1685209..1686687 (+) 1479 WP_062333137.1 oxygen-independent coproporphyrinogen III oxidase -
  AXE82_RS07415 (AXE82_07420) - 1686700..1687167 (+) 468 WP_062333140.1 hypothetical protein -
  AXE82_RS07420 (AXE82_07425) - 1687418..1688023 (+) 606 WP_062333143.1 class I SAM-dependent methyltransferase -
  AXE82_RS07425 (AXE82_07430) - 1688034..1688624 (-) 591 WP_062333146.1 DUF4442 domain-containing protein -
  AXE82_RS07430 (AXE82_07435) - 1688732..1689115 (+) 384 WP_062333147.1 HNH endonuclease -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 53888.48 Da        Isoelectric Point: 7.7434

>NTDB_id=169705 AXE82_RS07405 WP_062333134.1 1683508..1685001(-) (comM) [Moraxella osloensis strain CCUG 350]
MSFAQVYTRSVVGLNAPSVMVEVHLSQGLPAVTMVGLPEAAVRESKDRVRSAIINSGFQFPNRRLTINLAPADLPKDGAR
LDLPIAIGILAASGQIDETVLAQYEFIGELALNGDLRGIAGALAVSRALKVDRRILIVPKDNADEAVKVDGVKVLQADTL
KAVCQHLMNEQPLSEAEHKTSYQSANYMLDLADVKGQHQARRALEIAAAGGHSLLFCGSPGTGKTLMASRLPTILPPLND
HEALEVASIYSIANSDYDYGTRPFRQVHHTTSAVALVGGGSSPKPGEITLANRGVLFLDEIPEFDRKVLEVLRQPIENKE
IVISRANSQVRFPANFQLVAAMNPCPCGYYGDKSGRCQCRPEQIKRYQEKLSGPLLDRIDLHITVPALPASDLQSAQKGE
SSAAVRERVIQAYQRQQARQGKANNELSPSELDQFALLGDAESRILAMAQSRLNLSARGYHRVLRVARTIADLAGSEAIQ
TAHLTEALSYRSQLTNA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=169705 AXE82_RS07405 WP_062333134.1 1683508..1685001(-) (comM) [Moraxella osloensis strain CCUG 350]
ATGTCGTTTGCTCAAGTCTATACGCGCTCGGTGGTAGGTTTAAATGCGCCAAGCGTGATGGTTGAAGTACATTTATCGCA
AGGATTGCCCGCAGTCACCATGGTCGGCTTACCTGAAGCCGCGGTACGCGAGAGTAAAGATAGGGTGCGCTCTGCCATTA
TCAACTCGGGTTTTCAATTTCCCAATCGTCGTTTGACCATCAACCTTGCGCCCGCGGATTTACCCAAAGATGGCGCACGG
CTTGATTTGCCGATTGCCATAGGCATCTTGGCAGCCAGCGGGCAAATTGATGAAACCGTGCTTGCGCAGTACGAATTTAT
TGGCGAATTGGCGCTCAATGGCGATTTACGAGGCATTGCTGGGGCGTTGGCAGTATCACGGGCACTCAAGGTAGACCGGC
GCATCTTGATTGTTCCCAAAGACAATGCCGATGAAGCGGTCAAAGTCGATGGCGTGAAGGTGTTGCAAGCCGATACCCTC
AAAGCCGTGTGCCAACACTTGATGAATGAGCAACCACTCAGCGAAGCCGAGCATAAGACATCTTACCAATCAGCCAATTA
CATGCTTGATTTAGCCGATGTCAAAGGACAACACCAAGCACGTCGTGCGCTCGAAATTGCCGCCGCCGGTGGTCATTCAC
TATTGTTTTGTGGTTCACCGGGGACAGGCAAAACCTTGATGGCATCTCGCCTACCCACCATTTTGCCACCGCTTAATGAC
CATGAAGCGCTCGAAGTTGCCAGTATTTACTCGATTGCCAACAGTGATTATGACTACGGCACACGCCCTTTTCGCCAAGT
CCATCATACCACCTCAGCAGTGGCGCTCGTGGGCGGCGGCTCATCCCCCAAACCTGGTGAAATCACGCTCGCCAATCGGG
GGGTGTTATTTTTGGATGAGATTCCAGAGTTTGATCGCAAGGTACTTGAGGTACTCAGACAGCCCATCGAGAACAAAGAA
ATTGTCATCAGCCGTGCCAACTCTCAAGTGCGATTTCCCGCCAATTTTCAGCTAGTAGCAGCGATGAATCCCTGCCCCTG
TGGCTACTATGGGGATAAATCAGGTCGCTGCCAGTGTCGACCTGAGCAAATCAAACGCTATCAAGAAAAGCTATCAGGAC
CTTTGCTGGACCGTATTGATTTGCATATTACCGTGCCTGCCCTGCCTGCCAGTGATTTGCAGTCAGCACAGAAGGGTGAG
TCTTCTGCGGCAGTGCGTGAGCGGGTGATACAAGCCTATCAGCGTCAGCAAGCCAGACAGGGCAAAGCCAATAATGAACT
CTCCCCCAGTGAACTTGACCAATTTGCGCTGCTTGGCGATGCAGAAAGTCGTATTTTGGCAATGGCACAAAGTCGGCTGA
ATCTGTCCGCTCGCGGCTATCATCGCGTCCTTCGCGTCGCCCGCACGATTGCAGACTTGGCAGGCAGTGAAGCTATCCAA
ACCGCGCATCTGACAGAGGCACTCAGTTATCGTAGTCAATTAACGAATGCCTAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(399-491)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(190-391)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378QD09

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

53.024

99.799

0.529
  comM Glaesserella parasuis strain SC1401

52.2

100

0.525
  comM Haemophilus influenzae Rd KW20

51.594

100

0.521
  comM Vibrio campbellii strain DS40M4

52.218

99.799

0.521
  comM Legionella pneumophila str. Paris

51.703

100

0.519
  comM Legionella pneumophila strain ERS1305867

51.703

100

0.519
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

44.93

100

0.455

Multiple sequence alignment