Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AUP74_RS06995 | Genome accession | NZ_CP014143 |
| Coordinates | 1597753..1598337 (+) | Length | 194 a.a. |
| NCBI ID | WP_069946950.1 | Uniprot ID | A0A1C9W6T7 |
| Organism | Microbulbifer aggregans strain CCB-MM1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1592753..1603337
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUP74_RS06985 (AUP74_01411) | uvrA | 1593402..1596227 (-) | 2826 | WP_069946948.1 | excinuclease ABC subunit UvrA | - |
| AUP74_RS06990 (AUP74_01412) | - | 1596480..1597646 (+) | 1167 | WP_069946949.1 | MFS transporter | - |
| AUP74_RS06995 (AUP74_01413) | ssb | 1597753..1598337 (+) | 585 | WP_069946950.1 | single-stranded DNA-binding protein | Machinery gene |
| AUP74_RS07000 (AUP74_01414) | - | 1598353..1599189 (+) | 837 | WP_145924337.1 | sugar nucleotide-binding protein | - |
| AUP74_RS07005 (AUP74_01415) | fabB | 1599277..1600500 (-) | 1224 | WP_069946951.1 | beta-ketoacyl-ACP synthase I | - |
| AUP74_RS07010 (AUP74_01416) | fabA | 1600578..1601102 (-) | 525 | WP_069948749.1 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA | - |
| AUP74_RS07015 (AUP74_01417) | galU | 1601361..1602209 (+) | 849 | WP_069946952.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 20763.54 Da Isoelectric Point: 5.2494
>NTDB_id=168695 AUP74_RS06995 WP_069946950.1 1597753..1598337(+) (ssb) [Microbulbifer aggregans strain CCB-MM1]
MARGINKVILIGNLGADPETRYMPSGGAVTNVNLATSETWKDKQTGQQQERTEWHRVVFFNRLAEIAGEYLRKGSKVYIE
GSLRTRKWQDKQSGQDRYTTEIVASEMQMLDGRGEQGGYGQGMGGYDQQQGGGYGQQQGGGFQQGGQSSGYGQQGNAAPS
PMAPSQGGGHSANQGGNQGPAGGFDNSFDDDIPF
MARGINKVILIGNLGADPETRYMPSGGAVTNVNLATSETWKDKQTGQQQERTEWHRVVFFNRLAEIAGEYLRKGSKVYIE
GSLRTRKWQDKQSGQDRYTTEIVASEMQMLDGRGEQGGYGQGMGGYDQQQGGGYGQQQGGGFQQGGQSSGYGQQGNAAPS
PMAPSQGGGHSANQGGNQGPAGGFDNSFDDDIPF
Nucleotide
Download Length: 585 bp
>NTDB_id=168695 AUP74_RS06995 WP_069946950.1 1597753..1598337(+) (ssb) [Microbulbifer aggregans strain CCB-MM1]
ATGGCCCGGGGAATCAATAAAGTCATCCTGATCGGCAATCTGGGCGCGGATCCGGAAACCCGCTATATGCCCAGCGGCGG
TGCCGTTACCAATGTGAACCTGGCGACGTCCGAAACCTGGAAGGACAAGCAGACCGGTCAGCAGCAGGAGCGTACCGAGT
GGCACCGGGTGGTGTTCTTCAACCGCCTCGCAGAGATTGCCGGCGAGTACTTGCGCAAGGGCAGCAAGGTCTACATCGAG
GGCAGCCTGCGTACCCGCAAGTGGCAGGACAAGCAGTCCGGCCAGGACCGTTACACCACCGAGATTGTCGCCAGCGAGAT
GCAGATGCTGGACGGTCGTGGTGAGCAGGGCGGCTACGGCCAGGGCATGGGCGGTTACGACCAGCAGCAAGGCGGTGGCT
ACGGTCAGCAGCAGGGCGGTGGTTTCCAGCAGGGCGGTCAGTCCTCCGGCTACGGACAACAGGGCAACGCCGCACCGTCC
CCGATGGCTCCGTCCCAAGGCGGTGGCCACTCCGCTAATCAGGGTGGCAACCAGGGCCCTGCGGGTGGCTTCGATAACAG
CTTCGACGACGATATTCCCTTCTAA
ATGGCCCGGGGAATCAATAAAGTCATCCTGATCGGCAATCTGGGCGCGGATCCGGAAACCCGCTATATGCCCAGCGGCGG
TGCCGTTACCAATGTGAACCTGGCGACGTCCGAAACCTGGAAGGACAAGCAGACCGGTCAGCAGCAGGAGCGTACCGAGT
GGCACCGGGTGGTGTTCTTCAACCGCCTCGCAGAGATTGCCGGCGAGTACTTGCGCAAGGGCAGCAAGGTCTACATCGAG
GGCAGCCTGCGTACCCGCAAGTGGCAGGACAAGCAGTCCGGCCAGGACCGTTACACCACCGAGATTGTCGCCAGCGAGAT
GCAGATGCTGGACGGTCGTGGTGAGCAGGGCGGCTACGGCCAGGGCATGGGCGGTTACGACCAGCAGCAAGGCGGTGGCT
ACGGTCAGCAGCAGGGCGGTGGTTTCCAGCAGGGCGGTCAGTCCTCCGGCTACGGACAACAGGGCAACGCCGCACCGTCC
CCGATGGCTCCGTCCCAAGGCGGTGGCCACTCCGCTAATCAGGGTGGCAACCAGGGCCCTGCGGGTGGCTTCGATAACAG
CTTCGACGACGATATTCCCTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
54.315 |
100 |
0.552 |
| ssb | Glaesserella parasuis strain SC1401 |
50.256 |
100 |
0.505 |
| ssb | Neisseria gonorrhoeae MS11 |
47.12 |
98.454 |
0.464 |
| ssb | Neisseria meningitidis MC58 |
46.073 |
98.454 |
0.454 |