Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | A4C38_RS06030 | Genome accession | NZ_CP017440 |
| Coordinates | 1181881..1182396 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130215.1 | Uniprot ID | B5Z2A2 |
| Organism | Escherichia coli O157:H7 strain 3384 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1176881..1187396
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4C38_RS05985 (A4C38_05985) | csrA | 1177698..1177883 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| A4C38_RS06015 (A4C38_06015) | yqaB | 1179111..1179677 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| A4C38_RS06020 (A4C38_06020) | yqaA | 1179674..1180102 (+) | 429 | WP_001287450.1 | YqaA family protein | - |
| A4C38_RS06025 (A4C38_06025) | gshA | 1180175..1181731 (+) | 1557 | WP_000611787.1 | glutamate--cysteine ligase | - |
| A4C38_RS06030 (A4C38_06030) | luxS | 1181881..1182396 (+) | 516 | WP_001130215.1 | S-ribosylhomocysteine lyase | Regulator |
| A4C38_RS06035 (A4C38_06035) | emrB | 1182460..1183998 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| A4C38_RS06040 (A4C38_06040) | emrA | 1184015..1185187 (-) | 1173 | WP_001302673.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| A4C38_RS06045 (A4C38_06045) | emrR | 1185314..1185844 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| A4C38_RS06050 (A4C38_06050) | ygaH | 1185935..1186270 (-) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
| A4C38_RS06055 (A4C38_06055) | ygaZ | 1186260..1186997 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19444.24 Da Isoelectric Point: 5.0362
>NTDB_id=168671 A4C38_RS06030 WP_001130215.1 1181881..1182396(+) (luxS) [Escherichia coli O157:H7 strain 3384]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=168671 A4C38_RS06030 WP_001130215.1 1181881..1182396(+) (luxS) [Escherichia coli O157:H7 strain 3384]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
72.515 |
100 |
0.725 |