Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BG483_RS02180 Genome accession   NZ_CP017099
Coordinates   454567..454950 (+) Length   127 a.a.
NCBI ID   WP_069382728.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain DN1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 449567..459950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG483_RS02150 (BG483_02065) - 449615..450619 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  BG483_RS02155 (BG483_02070) pyrR 450643..451155 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  BG483_RS02160 (BG483_02075) ruvX 451267..451701 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  BG483_RS02165 (BG483_02080) - 451701..452270 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  BG483_RS02170 (BG483_02085) - 452319..453212 (-) 894 WP_009315060.1 energy transducer TonB -
  BG483_RS02175 (BG483_02090) gshB 453359..454312 (-) 954 WP_003100943.1 glutathione synthase -
  BG483_RS02180 (BG483_02095) pilG 454567..454950 (+) 384 WP_069382728.1 twitching motility response regulator PilG Regulator
  BG483_RS02185 (BG483_02100) pilH 454997..455362 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  BG483_RS02190 (BG483_02105) - 455413..455949 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  BG483_RS02195 (BG483_02110) pilJ 456034..458082 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  BG483_RS02200 (BG483_02115) pilK 458143..459018 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 13830.07 Da        Isoelectric Point: 7.8540

>NTDB_id=166337 BG483_RS02180 WP_069382728.1 454567..454950(+) (pilG) [Pseudomonas aeruginosa strain DN1]
MEQQSDGLKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLS
SKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=166337 BG483_RS02180 WP_069382728.1 454567..454950(+) (pilG) [Pseudomonas aeruginosa strain DN1]
ATGGAACAGCAATCCGACGGTTTGAAAACGATTCGTCGCACCGCCGAAACACTGCTGAAAAAGGTCGGTTGCGACGTGAT
CACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACATCATTTTCGTCGACATCATGATGC
CGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAGTCCACCCCGGTGATCATGCTGTCC
TCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTACCTCACCAAGCCGTTCAGCAAGGA
AGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCGTTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(9-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.561

89.764

0.669
  vicR Streptococcus mutans UA159

47.475

77.953

0.37

Multiple sequence alignment