Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BG483_RS02185 | Genome accession | NZ_CP017099 |
| Coordinates | 454997..455362 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain DN1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 449997..460362
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG483_RS02155 (BG483_02070) | pyrR | 450643..451155 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| BG483_RS02160 (BG483_02075) | ruvX | 451267..451701 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| BG483_RS02165 (BG483_02080) | - | 451701..452270 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| BG483_RS02170 (BG483_02085) | - | 452319..453212 (-) | 894 | WP_009315060.1 | energy transducer TonB | - |
| BG483_RS02175 (BG483_02090) | gshB | 453359..454312 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| BG483_RS02180 (BG483_02095) | pilG | 454567..454950 (+) | 384 | WP_069382728.1 | twitching motility response regulator PilG | Regulator |
| BG483_RS02185 (BG483_02100) | pilH | 454997..455362 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| BG483_RS02190 (BG483_02105) | - | 455413..455949 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| BG483_RS02195 (BG483_02110) | pilJ | 456034..458082 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| BG483_RS02200 (BG483_02115) | pilK | 458143..459018 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=166338 BG483_RS02185 WP_003084587.1 454997..455362(+) (pilH) [Pseudomonas aeruginosa strain DN1]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=166338 BG483_RS02185 WP_003084587.1 454997..455362(+) (pilH) [Pseudomonas aeruginosa strain DN1]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |