Detailed information
Bioinformatically predicted
Overview
| Name | comD/comD3 | Type | Regulator |
| Locus tag | AU077_RS00725 | Genome accession | NZ_CP013688 |
| Coordinates | 139933..140247 (+) | Length | 104 a.a. |
| NCBI ID | WP_058621376.1 | Uniprot ID | A0A2G3NS94 |
| Organism | Streptococcus gallolyticus strain ICDDRB-NRC-S1 | ||
| Function | phosphorylation of ComE (predicted from homology) Competence regulation |
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Genomic Context
Location: 134933..145247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AU077_RS00690 (AU077_00690) | - | 135730..136056 (+) | 327 | WP_058621371.1 | LytTR family DNA-binding domain-containing protein | - |
| AU077_RS00695 (AU077_00695) | comE/comE1 | 136073..136804 (+) | 732 | WP_058621372.1 | response regulator transcription factor | Regulator |
| AU077_RS00700 (AU077_00700) | - | 136809..138119 (+) | 1311 | WP_058621373.1 | sensor histidine kinase | - |
| AU077_RS11135 | - | 138137..138277 (-) | 141 | WP_014295304.1 | hypothetical protein | - |
| AU077_RS00705 (AU077_00705) | - | 138578..138877 (+) | 300 | WP_058621374.1 | DUF3884 family protein | - |
| AU077_RS00710 (AU077_00710) | - | 138887..139036 (+) | 150 | WP_039671232.1 | hypothetical protein | - |
| AU077_RS00715 (AU077_00715) | - | 139048..139359 (+) | 312 | WP_039671231.1 | bacteriocin immunity protein | - |
| AU077_RS11140 (AU077_00720) | - | 139631..139801 (+) | 171 | WP_058621375.1 | hypothetical protein | - |
| AU077_RS00725 (AU077_00725) | comD/comD3 | 139933..140247 (+) | 315 | WP_058621376.1 | GHKL domain-containing protein | Regulator |
| AU077_RS00730 (AU077_00730) | - | 140377..140634 (+) | 258 | WP_014295297.1 | hypothetical protein | - |
| AU077_RS00745 (AU077_00745) | rsgA | 141076..141948 (+) | 873 | WP_014295296.1 | ribosome small subunit-dependent GTPase A | - |
| AU077_RS00750 (AU077_00750) | rpe | 141955..142614 (+) | 660 | WP_058621377.1 | ribulose-phosphate 3-epimerase | - |
| AU077_RS00755 (AU077_00755) | - | 142611..143240 (+) | 630 | WP_058621378.1 | thiamine diphosphokinase | - |
| AU077_RS00760 (AU077_00760) | rmuC | 143242..144516 (+) | 1275 | WP_014295293.1 | DNA recombination protein RmuC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 11772.26 Da Isoelectric Point: 5.0616
>NTDB_id=164032 AU077_RS00725 WP_058621376.1 139933..140247(+) (comD/comD3) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MDCFEIPRITYIHSLAILFDNRIEATVLSGVPKISVANFYQDDNFVFMIENSTKEDSIPIDNVNQKGYSSKGNNRGIGLA
TVIEFHQEYGKLPIETSSSNHLFR
MDCFEIPRITYIHSLAILFDNRIEATVLSGVPKISVANFYQDDNFVFMIENSTKEDSIPIDNVNQKGYSSKGNNRGIGLA
TVIEFHQEYGKLPIETSSSNHLFR
Nucleotide
Download Length: 315 bp
>NTDB_id=164032 AU077_RS00725 WP_058621376.1 139933..140247(+) (comD/comD3) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGGATTGTTTCGAAATTCCACGTATTACCTACATTCATAGCCTTGCTATTCTGTTTGATAATAGGATTGAAGCTACAGT
ATTATCAGGTGTTCCTAAAATATCCGTAGCGAATTTTTATCAAGATGATAACTTTGTTTTTATGATTGAAAATTCAACCA
AAGAAGATAGTATTCCGATTGATAACGTTAATCAAAAAGGCTATTCAAGCAAAGGTAATAATCGTGGTATTGGCTTAGCA
ACAGTTATTGAATTTCATCAAGAATATGGCAAGCTACCCATTGAAACAAGCAGCTCAAATCACCTCTTTAGATAA
ATGGATTGTTTCGAAATTCCACGTATTACCTACATTCATAGCCTTGCTATTCTGTTTGATAATAGGATTGAAGCTACAGT
ATTATCAGGTGTTCCTAAAATATCCGTAGCGAATTTTTATCAAGATGATAACTTTGTTTTTATGATTGAAAATTCAACCA
AAGAAGATAGTATTCCGATTGATAACGTTAATCAAAAAGGCTATTCAAGCAAAGGTAATAATCGTGGTATTGGCTTAGCA
ACAGTTATTGAATTTCATCAAGAATATGGCAAGCTACCCATTGAAACAAGCAGCTCAAATCACCTCTTTAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comD/comD3 | Streptococcus equinus JB1 |
57.576 |
95.192 |
0.548 |
| comD/comD2 | Streptococcus equinus JB1 |
56.122 |
94.231 |
0.529 |
| comD/comD1 | Streptococcus equinus JB1 |
47.959 |
94.231 |
0.452 |
| comD/blpH | Streptococcus mutans UA159 |
43 |
96.154 |
0.413 |