Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   A6L58_RS11170 Genome accession   NZ_CP016682
Coordinates   2133738..2134019 (-) Length   93 a.a.
NCBI ID   WP_002214428.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M24705     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 2128738..2139019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L58_RS11135 (A6L58_11135) - 2129037..2129675 (-) 639 WP_002258545.1 7-carboxy-7-deazaguanine synthase QueE -
  A6L58_RS11140 (A6L58_11140) - 2129672..2130043 (-) 372 WP_002255771.1 DUF1304 domain-containing protein -
  A6L58_RS11145 (A6L58_11145) queD 2130312..2130734 (-) 423 WP_002214424.1 6-carboxytetrahydropterin synthase QueD -
  A6L58_RS11150 (A6L58_11150) - 2130741..2131259 (-) 519 WP_002241180.1 DUF1543 domain-containing protein -
  A6L58_RS11155 (A6L58_11155) queC 2131287..2131946 (-) 660 WP_002217873.1 7-cyano-7-deazaguanine synthase QueC -
  A6L58_RS15185 - 2132150..2132336 (-) 187 Protein_2078 NAD(P)H-quinone oxidoreductase -
  A6L58_RS11165 (A6L58_11165) - 2132491..2133711 (+) 1221 WP_002224009.1 YihY family inner membrane protein -
  A6L58_RS11170 (A6L58_11170) comA 2133738..2134019 (-) 282 WP_002214428.1 ATP-binding cassette domain-containing protein Regulator
  A6L58_RS14165 - 2134098..2134232 (-) 135 Protein_2081 IS1595 family transposase -
  A6L58_RS11175 (A6L58_11175) - 2134231..2134689 (-) 459 WP_002214429.1 hypothetical protein -
  A6L58_RS14520 (A6L58_11185) - 2135253..2135456 (-) 204 WP_002261355.1 hypothetical protein -
  A6L58_RS11195 (A6L58_11195) - 2136020..2136955 (-) 936 WP_002236741.1 immunity 49 family protein -

Sequence

Protein


Download         Length: 93 a.a.        Molecular weight: 10070.73 Da        Isoelectric Point: 6.7158

>NTDB_id=163690 A6L58_RS11170 WP_002214428.1 2133738..2134019(-) (comA) [Neisseria meningitidis strain M24705]
MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKILFLDAATSHLDIANEKAVNANLNGLSIIKIMAAHRK
ETVESADRKMSLG

Nucleotide


Download         Length: 282 bp        

>NTDB_id=163690 A6L58_RS11170 WP_002214428.1 2133738..2134019(-) (comA) [Neisseria meningitidis strain M24705]
ATGATTCACGAAGAAATCTCCGCCATGCCTATGGGCTATGAAACCTTGATCGGCGATATGGGCAGCGCACTGTCAGGCGG
ACAAAAACAACGCATCGTATTGGCGCGGGCCTTATATTGCGAACCGAAAATCCTATTTTTAGATGCAGCGACCAGCCATT
TGGATATTGCCAATGAAAAAGCAGTCAATGCAAACTTGAATGGCTTGTCTATCATAAAAATTATGGCGGCACACAGAAAG
GAAACGGTGGAATCAGCAGATAGGAAAATGTCTTTAGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(14-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis SK321

45.055

97.849

0.441
  comA/nlmT Streptococcus mutans UA159

45.977

93.548

0.43
  comA Streptococcus pneumoniae Rx1

43.956

97.849

0.43
  comA Streptococcus pneumoniae D39

43.956

97.849

0.43
  comA Streptococcus pneumoniae R6

43.956

97.849

0.43
  comA Streptococcus pneumoniae TIGR4

43.956

97.849

0.43
  comA Streptococcus mitis NCTC 12261

43.956

97.849

0.43
  comA Streptococcus gordonii str. Challis substr. CH1

42.857

97.849

0.419

Multiple sequence alignment