Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   ATM98_RS00055 Genome accession   NZ_CP013651
Coordinates   11132..13003 (+) Length   623 a.a.
NCBI ID   WP_061563637.1    Uniprot ID   -
Organism   Streptococcus sp. A12     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 6132..18003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ATM98_RS00040 (ATM98_00040) fmt 8135..9070 (+) 936 WP_061563635.1 methionyl-tRNA formyltransferase -
  ATM98_RS00045 (ATM98_00045) rsmB 9060..10373 (+) 1314 WP_061563636.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  ATM98_RS00050 (ATM98_00050) - 10395..11135 (+) 741 WP_048691932.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  ATM98_RS00055 (ATM98_00055) stkP 11132..13003 (+) 1872 WP_061563637.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  ATM98_RS00060 (ATM98_00060) liaF 13133..13828 (+) 696 WP_048691924.1 cell wall-active antibiotics response protein LiaF -
  ATM98_RS00065 (ATM98_00065) - 13825..14844 (+) 1020 WP_061563638.1 sensor histidine kinase -
  ATM98_RS00070 (ATM98_00070) - 14822..15454 (+) 633 WP_061563639.1 response regulator transcription factor -
  ATM98_RS00075 (ATM98_00075) - 15499..16905 (+) 1407 WP_061563640.1 Cof-type HAD-IIB family hydrolase -
  ATM98_RS00080 (ATM98_00080) - 16902..17270 (+) 369 WP_048715304.1 S1 RNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 623 a.a.        Molecular weight: 68504.55 Da        Isoelectric Point: 5.6130

>NTDB_id=163381 ATM98_RS00055 WP_061563637.1 11132..13003(+) (stkP) [Streptococcus sp. A12]
MIQIGKIFAGRYKIIRQIGRGGMADVYLARDLILDGEEVAVKVLRTNYQTDPIAVARFQREAKAMADLDHPNIVRITDIG
EEDGQQYLAMEYVAGLDLKRYIKENAPLSNEEAVRLMGQILLAMRLAHTQGIIHRDLKPQNVLLTSDGNAKVSDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKASIQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQKPLPSIIEENKNVP
QALENVVIKATAKKLSDRYKSVAEMYVDLSSCLSYERRNEKKLVFDDASKADTKTLPKVNVVPKPAPLPTLEARPAVHED
RPVASEDRTAPVSPKNKPRRRLRTRYKVLFVALALVLAAFAFLLYMSPANKTVPDVSGKTVAEARAIIEDQDLQVGDEKE
EYSDSVLEGYVIRTNPNAGAQKKENSKVDLVVSKGPSTFDMPDYTGRSREDAENDLKTTYKLSSKLISIEEVETNEVEPG
IVLEQSPAGGQKYDLTSNTKVVLKVSKESNSIELPSYVGSNYEFAVSNLVQIYGVKEANIERKTTSHLPDGVEVLPGHIV
SQTPEAQSSIDIKKTRIVLTVYEPKTESSSSTKASSSSSESSTSTTVESHSNTEPSATTEPES

Nucleotide


Download         Length: 1872 bp        

>NTDB_id=163381 ATM98_RS00055 WP_061563637.1 11132..13003(+) (stkP) [Streptococcus sp. A12]
ATGATTCAAATCGGCAAAATTTTTGCCGGACGATATAAGATAATCCGCCAAATCGGGCGTGGAGGAATGGCAGACGTCTA
CCTCGCTCGGGATTTAATCTTAGATGGTGAAGAAGTTGCAGTTAAAGTACTGAGGACCAATTACCAAACAGATCCAATTG
CAGTTGCTCGCTTCCAACGAGAGGCCAAAGCGATGGCAGATTTGGATCATCCAAATATCGTTCGGATCACGGATATCGGT
GAAGAGGATGGCCAGCAATACTTGGCGATGGAATATGTCGCTGGTTTGGACTTGAAACGCTATATCAAAGAAAATGCTCC
TCTCTCAAATGAAGAAGCTGTTCGCTTGATGGGGCAAATCCTTCTTGCTATGCGCTTGGCGCACACGCAAGGCATTATTC
ACCGTGATTTGAAACCTCAAAATGTCCTTTTAACATCGGACGGAAATGCCAAGGTTTCTGACTTTGGGATTGCAGTAGCC
TTTGCAGAGACCAGTCTCACCCAGACCAACTCTATGTTGGGTTCGGTTCATTATTTATCACCAGAGCAAGCCAGAGGATC
GAAGGCTTCTATTCAAAGTGATATCTATGCAATGGGGATCATTTTCTACGAAATGCTGACGGGTCATATCCCTTATGATG
GGGATAGTGCAGTGACCATTGCGCTGCAACATTTCCAAAAACCACTTCCGTCCATCATTGAAGAGAACAAAAATGTTCCG
CAGGCTTTGGAAAATGTTGTTATTAAGGCCACAGCAAAGAAACTATCCGATCGCTATAAGTCGGTAGCTGAAATGTATGT
CGACTTGTCAAGTTGTCTATCTTATGAACGCCGTAATGAGAAAAAATTAGTCTTTGATGACGCTTCAAAAGCGGATACCA
AGACCTTACCAAAGGTGAACGTGGTTCCAAAACCGGCTCCACTTCCAACATTGGAAGCTCGTCCTGCAGTTCATGAGGAC
CGACCAGTGGCTTCAGAGGATCGAACAGCTCCAGTTTCTCCAAAAAATAAGCCACGTCGTCGTTTGCGGACGCGCTACAA
GGTATTGTTTGTCGCCCTAGCTTTGGTACTAGCTGCCTTTGCCTTTCTTCTTTATATGAGTCCAGCCAACAAAACAGTTC
CGGATGTATCTGGAAAAACGGTAGCAGAAGCTCGGGCTATCATTGAAGATCAGGATCTTCAAGTGGGAGACGAAAAAGAA
GAATACAGTGATTCGGTGCTGGAAGGCTATGTAATCCGTACCAATCCAAATGCAGGAGCTCAGAAAAAGGAAAACAGCAA
GGTTGATTTGGTTGTCTCGAAAGGGCCAAGCACCTTTGACATGCCGGACTATACTGGTAGGTCTAGAGAAGATGCGGAAA
ACGATCTGAAAACCACTTATAAGCTTTCTAGCAAGCTGATTTCGATTGAAGAAGTCGAGACCAATGAAGTGGAGCCAGGA
ATCGTGCTTGAGCAATCTCCTGCTGGTGGTCAAAAATATGATTTGACTTCTAATACCAAGGTTGTTCTGAAAGTATCGAA
GGAAAGTAATTCGATTGAGTTACCAAGTTATGTTGGTTCTAATTATGAATTTGCTGTCTCTAATCTCGTACAGATTTACG
GGGTGAAGGAAGCAAATATTGAACGGAAGACCACATCGCATCTGCCGGACGGAGTAGAAGTCTTGCCAGGTCATATTGTG
AGTCAGACTCCAGAAGCTCAATCGAGCATCGATATTAAAAAGACTCGCATTGTCTTAACCGTATACGAACCGAAGACAGA
ATCATCAAGTAGCACGAAAGCTTCAAGTAGTTCATCAGAAAGTTCAACCTCTACAACTGTAGAATCCCATTCCAATACGG
AACCTTCGGCTACTACTGAACCAGAATCTTAA

Domains

Predicted by InterproScan.

Protein kinase domain (Pkinase)

(12-255)

PASTA domain (PASTA)

(513-582)

PASTA domain (PASTA)

(372-434)

PASTA domain (PASTA)

(440-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

63.761

93.9

0.599
  stkP Streptococcus pneumoniae D39

63.59

93.9

0.597
  stkP Streptococcus pneumoniae R6

63.59

93.9

0.597
  stkP Streptococcus pneumoniae Rx1

63.419

93.9

0.596
  stkP/pknB Streptococcus salivarius strain HSISS4

53.209

95.024

0.506
  pknB Streptococcus mutans UA159

57.934

86.998

0.504

Multiple sequence alignment