Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | ATY38_RS02800 | Genome accession | NZ_CP013341 |
| Coordinates | 586850..587137 (+) | Length | 95 a.a. |
| NCBI ID | WP_062557949.1 | Uniprot ID | A0A0S3AGF0 |
| Organism | Nitrosomonas ureae strain Nm10 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 581850..592137
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATY38_RS02785 (ATY38_02785) | - | 583011..583757 (-) | 747 | WP_062557946.1 | Nif3-like dinuclear metal center hexameric protein | - |
| ATY38_RS02790 (ATY38_02790) | - | 583836..584975 (+) | 1140 | WP_097104206.1 | Do family serine endopeptidase | - |
| ATY38_RS02795 (ATY38_02795) | - | 585008..586660 (+) | 1653 | WP_062557948.1 | hypothetical protein | - |
| ATY38_RS02800 (ATY38_02800) | comE | 586850..587137 (+) | 288 | WP_062557949.1 | ComEA family DNA-binding protein | Machinery gene |
| ATY38_RS02805 (ATY38_02805) | cysM | 587264..588169 (+) | 906 | WP_062557950.1 | cysteine synthase CysM | - |
| ATY38_RS02810 (ATY38_02810) | ybgC | 588192..588602 (+) | 411 | WP_062557951.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| ATY38_RS02815 (ATY38_02815) | tolQ | 588599..589279 (+) | 681 | WP_062557952.1 | protein TolQ | - |
| ATY38_RS02820 (ATY38_02820) | tolR | 589299..589712 (+) | 414 | WP_062557953.1 | protein TolR | - |
| ATY38_RS02825 (ATY38_02825) | tolA | 589723..590667 (+) | 945 | WP_062557954.1 | cell envelope integrity protein TolA | - |
| ATY38_RS02830 (ATY38_02830) | tolB | 590715..592013 (+) | 1299 | WP_062560073.1 | Tol-Pal system beta propeller repeat protein TolB | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10133.65 Da Isoelectric Point: 5.8173
>NTDB_id=162150 ATY38_RS02800 WP_062557949.1 586850..587137(+) (comE) [Nitrosomonas ureae strain Nm10]
MQKWFLLMALVFLFTGTAFAAVNINTASQAELESLQGIGPAKAKAIIEHREKSGTFASVDDLAKVSGIGQGTIKQLRDVI
TVEGEKATEAPAKQE
MQKWFLLMALVFLFTGTAFAAVNINTASQAELESLQGIGPAKAKAIIEHREKSGTFASVDDLAKVSGIGQGTIKQLRDVI
TVEGEKATEAPAKQE
Nucleotide
Download Length: 288 bp
>NTDB_id=162150 ATY38_RS02800 WP_062557949.1 586850..587137(+) (comE) [Nitrosomonas ureae strain Nm10]
ATGCAGAAATGGTTTCTACTGATGGCTCTGGTATTCTTGTTTACTGGCACTGCATTCGCAGCAGTCAATATCAATACGGC
GTCGCAAGCTGAACTTGAATCTTTACAAGGTATTGGTCCTGCTAAAGCAAAAGCAATCATTGAACATCGCGAAAAAAGCG
GCACCTTTGCTTCCGTTGATGATTTGGCGAAAGTAAGCGGTATTGGTCAAGGAACTATCAAACAACTTCGCGATGTAATT
ACCGTCGAAGGTGAAAAAGCCACAGAAGCTCCGGCCAAACAGGAGTAG
ATGCAGAAATGGTTTCTACTGATGGCTCTGGTATTCTTGTTTACTGGCACTGCATTCGCAGCAGTCAATATCAATACGGC
GTCGCAAGCTGAACTTGAATCTTTACAAGGTATTGGTCCTGCTAAAGCAAAAGCAATCATTGAACATCGCGAAAAAAGCG
GCACCTTTGCTTCCGTTGATGATTTGGCGAAAGTAAGCGGTATTGGTCAAGGAACTATCAAACAACTTCGCGATGTAATT
ACCGTCGAAGGTGAAAAAGCCACAGAAGCTCCGGCCAAACAGGAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
53.763 |
97.895 |
0.526 |
| comE | Neisseria gonorrhoeae MS11 |
53.763 |
97.895 |
0.526 |
| comE | Neisseria gonorrhoeae MS11 |
53.763 |
97.895 |
0.526 |
| comE | Neisseria gonorrhoeae MS11 |
53.763 |
97.895 |
0.526 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
53.247 |
81.053 |
0.432 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
40.217 |
96.842 |
0.389 |