Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BAY21_RS08040 Genome accession   NZ_CP016439
Coordinates   1523308..1523988 (+) Length   226 a.a.
NCBI ID   WP_011226224.1    Uniprot ID   Q5M3P0
Organism   Streptococcus thermophilus strain CS8     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1518308..1528988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAY21_RS08020 (BAY21_08020) - 1519567..1520916 (-) 1350 WP_011227359.1 MATE family efflux transporter -
  BAY21_RS11195 - 1521044..1521295 (-) 252 WP_011227358.1 solute carrier family 23 protein -
  BAY21_RS11200 - 1521289..1521825 (-) 537 WP_353939543.1 solute carrier family 23 protein -
  BAY21_RS11205 (BAY21_08030) - 1521756..1522316 (-) 561 WP_011227356.1 solute carrier family 23 protein -
  BAY21_RS08035 (BAY21_08035) - 1522316..1522857 (-) 542 Protein_1522 xanthine phosphoribosyltransferase -
  BAY21_RS08040 (BAY21_08040) braR 1523308..1523988 (+) 681 WP_011226224.1 response regulator transcription factor Regulator
  BAY21_RS08045 (BAY21_08045) - 1523978..1524952 (+) 975 WP_011227354.1 sensor histidine kinase -
  BAY21_RS08050 (BAY21_08050) - 1525096..1525854 (+) 759 WP_011227353.1 ABC transporter ATP-binding protein -
  BAY21_RS08055 (BAY21_08055) - 1525856..1527856 (+) 2001 WP_011227352.1 ABC transporter permease -
  BAY21_RS08060 (BAY21_08060) - 1527941..1528138 (+) 198 Protein_1527 YkgJ family cysteine cluster protein -
  BAY21_RS10430 - 1528140..1528319 (+) 180 Protein_1528 ABC transporter permease -
  BAY21_RS08065 (BAY21_08065) - 1528330..1528779 (+) 450 WP_011227350.1 cytidine deaminase family protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26100.45 Da        Isoelectric Point: 4.9992

>NTDB_id=160304 BAY21_RS08040 WP_011226224.1 1523308..1523988(+) (braR) [Streptococcus thermophilus strain CS8]
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQNLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=160304 BAY21_RS08040 WP_011226224.1 1523308..1523988(+) (braR) [Streptococcus thermophilus strain CS8]
ATGCATAAGATTTTATTAGTTGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATGCTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAGCCCCACTTGGTTCTTATGGACATTG
GTTTACCTCTATTTAATGGTTATCATTGGTGTCAGGAAATTCGGAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCC
AGAGATCAGGCCATGGATATCGTTATGGCAATCAATATGGGTGGGGACGACTTTGTGACTAAACCCTTTGACCAAAATGT
TCTCTTGGCAAAAATTCAAGGGCTTTTGCGCCGATCTTATGAGTTTGGAAAGGATCAGAATCTTTTGGAATATATGGGTG
TGATTTTGAACCTTAAGGCCATGGATCTGGTTTATCAGGGAGAAGTCGTTTCTTTGACCAAGAACGAGTTTCAGATTTTA
CAAGTTCTCTTCGACCATGCTGGAAATATCGTTAGTCGGGAAGACCTCATGAAGGAGCTTTGGAATAGTGACTTCTTTAT
TGATGATAATACCCTGTCTGTCAATGTGGCACGTTTACGTAAGAAGTTAGAGGCTGTTGGTTTGAAGGACTTTATTGAAA
CCAAGAAAGGTGTCGGTTACGGGTTGCGTCATGATGGATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M3P0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

52.294

96.46

0.504
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363

Multiple sequence alignment