Detailed information NTG0160124

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: ASU28_RS02050
• Genome accession: NZ_CP013130
• Coordinates: 438908..441058 (+)
• Length: 716 a.a.
• NCBI ID: WP_033611265.1
• Uniprot ID: -
• Organism: Lactiplantibacillus paraplantarum strain L-ZS9
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 433908..446058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASU28_RS02020 (ASU28_02020)	-	434194..435522 (+)	1329	WP_033611273.1	sensor histidine kinase	-
ASU28_RS02025 (ASU28_02025)	-	435523..436266 (+)	744	WP_033611272.1	LytTR family transcriptional regulator DNA-binding domain-containing protein	-
ASU28_RS02030 (ASU28_02030)	-	436385..437128 (+)	744	WP_033611270.1	response regulator transcription factor	-
ASU28_RS02035 (ASU28_02035)	-	437421..438248 (-)	828	WP_225355157.1	CPBP family intramembrane glutamic endopeptidase	-
ASU28_RS02040 (ASU28_02040)	plnF	438288..438446 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
ASU28_RS02045 (ASU28_02045)	plnE	438471..438641 (-)	171	WP_033611266.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
ASU28_RS02050 (ASU28_02050)	comA	438908..441058 (+)	2151	WP_033611265.1	peptide cleavage/export ABC transporter	Regulator
ASU28_RS02055 (ASU28_02055)	-	441074..442450 (+)	1377	WP_033611264.1	HlyD family secretion protein	-
ASU28_RS02060 (ASU28_02060)	-	442540..443229 (+)	690	WP_033611263.1	CPBP family intramembrane glutamic endopeptidase	-
ASU28_RS02065 (ASU28_02065)	-	443289..443957 (+)	669	WP_033611262.1	CPBP family intramembrane glutamic endopeptidase	-
ASU28_RS02070 (ASU28_02070)	-	444044..444724 (+)	681	WP_033611261.1	CPBP family intramembrane glutamic endopeptidase	-
ASU28_RS02075 (ASU28_02075)	-	444820..445506 (+)	687	WP_033611260.1	CPBP family intramembrane glutamic endopeptidase	-
ASU28_RS02080 (ASU28_02080)	-	445662..445865 (+)	204	WP_033609515.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 80096.94 Da
• Isoelectric Point: 6.6531

>NTDB_id=160124 ASU28_RS02050 WP_033611265.1 438908..441058(+) (comA) [Lactiplantibacillus paraplantarum strain L-ZS9]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFEVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVVLFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTVEIVSRFTDASKIIDALASTIVSLFLDVSIIIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKIAIVGMSGSGKSTLVKLLIDFYQPNSGDVMLNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDVITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=160124 ASU28_RS02050 WP_033611265.1 438908..441058(+) (comA) [Lactiplantibacillus paraplantarum strain L-ZS9]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGACATGAGTCTTTTCGAGGTCCAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTTGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGTCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGACAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGTGGAAATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCATTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTGGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTGTGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGATTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATGCTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCAGCCCAAGTC
TTGATATTTGATGAGTCGACAAGTGGACTGGATGTAATTACTGAAAAACAATTAATCGATAACTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter (ABC_tran) (498-648)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.485	99.581	0.582
comA	Streptococcus pneumoniae Rx1	58.205	99.581	0.58
comA	Streptococcus pneumoniae D39	58.205	99.581	0.58
comA	Streptococcus pneumoniae R6	58.205	99.581	0.58
comA	Streptococcus pneumoniae TIGR4	58.065	99.581	0.578
comA	Streptococcus mitis SK321	57.924	99.581	0.577
comA	Streptococcus gordonii str. Challis substr. CH1	56.825	100	0.57
comA/nlmT	Streptococcus mutans UA159	54.039	100	0.542