Detailed information NTG0158500

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AN415_RS01810
• Genome accession: NZ_CP012952
• Coordinates: 392921..393979 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain D36
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 387921..398979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AN415_RS01795 (AN415_00366)	-	389027..389359 (+)	333	WP_000169601.1	hypothetical protein	-
AN415_RS01800 (AN415_00367)	-	389362..390186 (+)	825	WP_086245490.1	putative RNA methyltransferase	-
AN415_RS01805 (AN415_00368)	ponA	390204..392759 (-)	2556	WP_000736663.1	penicillin-binding protein PBP1a	-
AN415_RS01810 (AN415_00369)	pilM	392921..393979 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
AN415_RS01815 (AN415_00370)	pilN	393979..394620 (+)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
AN415_RS01820 (AN415_00371)	pilO	394617..395357 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
AN415_RS01825 (AN415_00372)	pilP	395368..395895 (+)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
AN415_RS01830 (AN415_00373)	pilQ	395958..398123 (+)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
AN415_RS01835 (AN415_00374)	aroK	398135..398704 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=158500 AN415_RS01810 WP_002014066.1 392921..393979(+) (pilM) [Acinetobacter baumannii strain D36]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=158500 AN415_RS01810 WP_002014066.1 392921..393979(+) (pilM) [Acinetobacter baumannii strain D36]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423