Detailed information NTG0155986

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: LLUC11_RS08855
• Genome accession: NZ_CP015904
• Coordinates: 1821358..1823862 (-)
• Length: 834 a.a.
• NCBI ID: WP_060416512.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain UC11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1816358..1828862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUC11_RS08830 (LLUC11_1710)	-	1817533..1818216 (+)	684	WP_003130398.1	lactate utilization protein C	-
LLUC11_RS08835 (LLUC11_1711)	-	1818290..1819003 (-)	714	WP_023188576.1	Bax inhibitor-1/YccA family protein	-
LLUC11_RS08840 (LLUC11_1712)	-	1819116..1820030 (-)	915	WP_012898318.1	diacylglycerol kinase family protein	-
LLUC11_RS08845 (LLUC11_1713)	-	1820186..1820698 (-)	513	WP_003132795.1	HD domain-containing protein	-
LLUC11_RS08850 (LLUC11_1714)	rpsT	1821031..1821264 (+)	234	WP_010906113.1	30S ribosomal protein S20	-
LLUC11_RS08855 (LLUC11_1715)	recD/recD2/recDB	1821358..1823862 (-)	2505	WP_060416512.1	ATP-dependent RecD-like DNA helicase	Machinery gene
LLUC11_RS08860 (LLUC11_1716)	-	1823859..1824452 (-)	594	WP_010906114.1	histidine phosphatase family protein	-
LLUC11_RS08865 (LLUC11_1717)	pheA	1824455..1825294 (-)	840	WP_023188548.1	prephenate dehydratase	-
LLUC11_RS08870 (LLUC11_1718)	-	1825296..1825784 (-)	489	WP_017864896.1	shikimate kinase	-
LLUC11_RS08875 (LLUC11_1719)	aroA	1825808..1827100 (-)	1293	WP_023188546.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
LLUC11_RS08880 (LLUC11_1720)	-	1827221..1828285 (-)	1065	WP_010906116.1	prephenate dehydrogenase	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 92961.42 Da
• Isoelectric Point: 4.4906

>NTDB_id=155986 LLUC11_RS08855 WP_060416512.1 1821358..1823862(-) (recD/recD2/recDB) [Lactococcus lactis subsp. lactis strain UC11]
MIEKTYFTGSIEAIFFSNPSNFYKVLLIEIDETNAEYDDFEIVVNGTIGDVVEGDSYTFYGQLTQHPKYGEQLQVSQYEK
AVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDSILEAPEKLDGLLTLARKNSFIKRLRENHGMEKVLTKLAEY
GLPSKITFQIYELYKEETIEKIEENPYQLVEDVKGVGFKTADKIASSLGIEADSPNRFRAALMHEVNTHSQSTGDTYIEA
KNLLEMTIDLLEEARNVEVNPSAVAEEINGLIVDGKVQQEGTKIFENSLYFAEDGIRKSLTALTNRSGKDFADEKLLTVL
AEVERDLEITYDDLQKQAIISAMNQQFFILTGGPGTGKTTIINGFIETYARIHQLDLDPDHYNDDVFPILLAAPTGRASR
RMNELTGLPAATIHRHLGLGQDEAEDALGNELSGALLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPSVKLDKIFRQGDDSTITDLAHHIKDGQLPSDFTAKKPDRSYFEVSANFVPQMVEQIASAWQKRGNNPFE
LQILAPMYKGMAGINAMNVLLQNLFNPLNDRLEFALGDMKFREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQD
ELVMDFDGQELTYPRAEWYKITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTYLIERFMGENPAAKNLSVEIVSEKVTDKKEISDKEKKPAAPVELQGQIRSVSKKMPAQVEEISLFEDEEI
ETLDKGSLTEALILSGNFDPLIGLTQQDFAIFNK

Nucleotide

• Length: 2505 bp

>NTDB_id=155986 LLUC11_RS08855 WP_060416512.1 1821358..1823862(-) (recD/recD2/recDB) [Lactococcus lactis subsp. lactis strain UC11]
ATGATTGAAAAAACTTATTTTACTGGTTCGATTGAGGCAATATTTTTCTCCAATCCCAGTAATTTTTATAAAGTTCTACT
CATTGAAATTGATGAAACTAATGCTGAATATGATGATTTTGAAATTGTGGTTAACGGGACAATTGGGGATGTGGTTGAAG
GAGATTCTTATACATTTTATGGTCAATTGACGCAGCATCCTAAATATGGGGAACAATTACAGGTCAGTCAATATGAAAAA
GCAGTGCCGACTTCTGGTGCTGGTTTAGTTAAATATTTTTCTTCAGATAAATTTCCTGGAATTGGTAAGAAAACGGCAGA
AAAAATTGTTGAAACTTTTCCTGAAAATACGGTAGATTCAATTTTAGAAGCGCCGGAAAAATTGGATGGTCTATTGACTC
TAGCCAGAAAAAATTCATTTATCAAACGATTACGTGAGAATCATGGAATGGAAAAAGTGCTGACCAAGCTTGCAGAATAT
GGCTTACCAAGCAAAATCACTTTTCAAATTTATGAACTTTATAAAGAAGAAACGATTGAAAAAATTGAGGAAAATCCTTA
TCAGCTTGTGGAAGATGTTAAGGGAGTTGGTTTTAAAACAGCTGATAAGATTGCAAGTAGTTTAGGAATTGAAGCGGATA
GCCCTAATCGATTTCGAGCGGCATTGATGCATGAGGTCAATACACATTCGCAATCAACAGGTGATACTTACATTGAAGCC
AAAAATTTACTTGAGATGACGATAGACTTACTTGAAGAAGCTCGTAATGTCGAGGTCAATCCGTCTGCTGTTGCGGAGGA
AATTAATGGTTTAATTGTTGATGGAAAAGTGCAACAAGAAGGAACAAAAATATTTGAGAATTCCTTGTACTTCGCTGAGG
ACGGGATTCGGAAATCACTGACAGCATTAACTAATCGTTCGGGTAAAGATTTTGCTGATGAAAAGTTACTGACAGTATTG
GCTGAAGTTGAAAGAGATTTAGAAATTACTTATGATGATTTGCAAAAGCAAGCCATTATTAGTGCAATGAATCAGCAATT
TTTCATTTTGACTGGTGGACCAGGAACTGGTAAAACAACAATTATCAATGGTTTTATTGAAACTTATGCCCGTATTCATC
AGCTAGATTTGGACCCAGACCATTATAATGATGACGTCTTTCCTATATTACTGGCAGCACCGACTGGTCGAGCTTCAAGA
CGGATGAATGAGTTGACTGGTCTTCCAGCAGCGACGATTCACCGCCATTTGGGTTTGGGACAAGATGAAGCAGAAGATGC
TCTTGGAAATGAATTGTCTGGTGCTCTTTTGATTGTTGACGAATTTTCTATGGTTGATACTTGGTTAGCTAATAAACTTT
TTCAAGCGATTCCTGGTTCAATGAAAGTTCTCCTTGTTGGAGATGCTGACCAGCTTCCTTCTGTGGGGCCAGGACAAATT
TTTGCGGATTTACTAAAAATTCCAGAAATTCCGTCAGTAAAATTGGATAAGATTTTTCGTCAAGGGGATGATTCTACCAT
TACTGATTTAGCTCACCACATCAAAGATGGGCAATTGCCAAGTGATTTCACGGCGAAAAAACCTGACCGTTCTTATTTTG
AGGTCAGTGCTAATTTTGTTCCTCAGATGGTTGAACAAATCGCAAGTGCATGGCAAAAAAGAGGGAATAATCCTTTTGAA
TTACAAATCTTAGCGCCTATGTATAAAGGAATGGCCGGAATTAATGCAATGAATGTTCTTTTGCAAAATCTCTTTAATCC
GCTTAACGACCGACTTGAATTCGCTTTGGGTGATATGAAATTTCGTGAAGGAGATAAAGTTCTTCATTTAGTAAATGATG
CTGAGGCCAATGTATTTAACGGAGATTTGGGACAAATCGTAGAATTGATTGCAGCAAAATATACTGACAGTAAACAAGAT
GAGTTGGTGATGGATTTTGATGGTCAAGAATTGACTTATCCAAGAGCGGAGTGGTATAAAATTACTCTGGCTTATGCTAT
GTCCATTCATAAATCTCAAGGTTCGGAGTTTTCCACAGTTATTGTGCCGATGGTTTCTTCGTATTCACGGATGTTAGAGC
GAAATTTGCTTTATACGGCAATTACAAGGGCTAAACAAAGTCTGATTTTACTTGGTGAAGAACGAGCTTTTGCACAAGCG
GTGGCGCGTGAAGGGGCGAATCGAAAGACCTATCTGATTGAGCGATTTATGGGAGAAAATCCAGCGGCTAAAAATCTGTC
AGTAGAAATTGTGAGTGAAAAAGTTACTGACAAAAAAGAAATATCTGACAAAGAGAAGAAGCCTGCAGCGCCAGTAGAAT
TACAAGGGCAAATTCGTTCTGTCAGTAAAAAAATGCCAGCACAAGTAGAAGAAATTTCTTTATTTGAAGATGAAGAAATT
GAAACACTGGATAAGGGAAGCTTGACAGAAGCACTTATTTTGTCAGGAAATTTTGACCCTTTAATTGGTTTAACTCAACA
AGACTTTGCAATCTTTAATAAATAA

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (577-646)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (664-710)

• Helix-hairpin-helix containing domain (HHH_RecD2) (146-237)

• AAA domain (AAA_30) (331-522)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	42.042	90.408	0.38