Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | AMD33_RS11505 | Genome accession | NZ_CP012588 |
| Coordinates | 76046..76255 (+) | Length | 69 a.a. |
| NCBI ID | WP_002946147.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain MN-BM-A01 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 71046..81255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD33_RS00390 (AMD33_00390) | - | 71486..71995 (+) | 510 | WP_014607952.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| AMD33_RS00395 (AMD33_00395) | - | 72306..72863 (+) | 558 | WP_002949523.1 | ECF transporter S component | - |
| AMD33_RS00400 (AMD33_00400) | - | 72866..73516 (+) | 651 | WP_014727315.1 | phosphatase PAP2 family protein | - |
| AMD33_RS00405 (AMD33_00405) | comR | 73711..74610 (+) | 900 | WP_014607953.1 | helix-turn-helix domain-containing protein | Regulator |
| AMD33_RS11495 | - | 74847..75278 (+) | 432 | Protein_74 | cysteine peptidase family C39 domain-containing protein | - |
| AMD33_RS11500 | - | 75308..75973 (+) | 666 | Protein_75 | ABC transporter transmembrane domain-containing protein | - |
| AMD33_RS11505 (AMD33_00425) | comA | 76046..76255 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| AMD33_RS00430 (AMD33_00430) | - | 76310..76878 (+) | 569 | Protein_77 | ATP-binding cassette domain-containing protein | - |
| AMD33_RS00435 (AMD33_00435) | - | 77072..77302 (+) | 231 | WP_230772686.1 | DUF805 domain-containing protein | - |
| AMD33_RS11510 | - | 77265..77549 (-) | 285 | WP_014727318.1 | hypothetical protein | - |
| AMD33_RS11515 (AMD33_00440) | - | 77789..78685 (-) | 897 | WP_224102957.1 | urease cluster protein | - |
| AMD33_RS00445 (AMD33_00445) | - | 79090..79605 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
| AMD33_RS00450 (AMD33_00450) | - | 79630..79932 (+) | 303 | WP_002886558.1 | urease subunit gamma | - |
| AMD33_RS00455 (AMD33_00455) | - | 79944..80255 (+) | 312 | WP_002886559.1 | urease subunit beta | - |
Sequence
Protein
Download Length: 69 a.a. Molecular weight: 8157.54 Da Isoelectric Point: 9.7339
>NTDB_id=155648 AMD33_RS11505 WP_002946147.1 76046..76255(+) (comA) [Streptococcus thermophilus strain MN-BM-A01]
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
Nucleotide
Download Length: 210 bp
>NTDB_id=155648 AMD33_RS11505 WP_002946147.1 76046..76255(+) (comA) [Streptococcus thermophilus strain MN-BM-A01]
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus gordonii str. Challis substr. CH1 |
54.167 |
100 |
0.565 |
| comA | Streptococcus mitis NCTC 12261 |
52.778 |
100 |
0.551 |
| comA | Streptococcus pneumoniae Rx1 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae D39 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae R6 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae TIGR4 |
51.389 |
100 |
0.536 |
| comA | Streptococcus mitis SK321 |
50 |
100 |
0.522 |
| comA/nlmT | Streptococcus mutans UA159 |
44.286 |
100 |
0.449 |