Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   DE8669_RS04820 Genome accession   NZ_CP012391
Coordinates   922845..923456 (+) Length   203 a.a.
NCBI ID   WP_065826063.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DE8669     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 917845..928456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DE8669_RS04800 (DE8669_0899) - 917872..918381 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  DE8669_RS04805 (DE8669_0900) - 919681..920268 (-) 588 WP_002223431.1 superoxide dismutase -
  DE8669_RS04810 (DE8669_0901) dnaB 920432..921838 (+) 1407 WP_002225362.1 replicative DNA helicase -
  DE8669_RS04815 (DE8669_0902) pilH 922147..922815 (+) 669 WP_061696530.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  DE8669_RS04820 (DE8669_0903) pilV 922845..923456 (+) 612 WP_065826063.1 type IV pilus modification protein PilV Machinery gene
  DE8669_RS04825 (DE8669_0904) pilJ 923453..924439 (+) 987 WP_065826047.1 PilW family protein Machinery gene
  DE8669_RS04830 (DE8669_0905) pilK 924418..925017 (+) 600 WP_065826048.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  DE8669_RS04835 (DE8669_0906) pilX 925022..925495 (+) 474 WP_195182879.1 PilX family type IV pilin Machinery gene
  DE8669_RS04840 (DE8669_0907) dut 927378..927830 (+) 453 WP_002229326.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22174.09 Da        Isoelectric Point: 4.8128

>NTDB_id=154073 DE8669_RS04820 WP_065826063.1 922845..923456(+) (pilV) [Neisseria meningitidis strain DE8669]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNYHTLSVVDGDFAIDAIKTKAQLAEEQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTLSGNAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDITRTNLETNGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=154073 DE8669_RS04820 WP_065826063.1 922845..923456(+) (pilV) [Neisseria meningitidis strain DE8669]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCTGGTATGGCGCTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACGCAAACCA
TCGTCAGTCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACTATCATACACTATCAGTTGTGGATGGCGATTTTGCGATTGATGCCATAAAAACTAAGGC
GCAGTTGGCAGAGGAACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCATTACG
CCGTCTGCAAGGATTCGTCGGGTAACGCGCCGACATTGTCCGGCAATGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCACCCGTACGAATCTTGAGACGAA
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

94.175

100

0.956
  pilI Neisseria gonorrhoeae MS11

84.236

100

0.842
  pilV Neisseria gonorrhoeae MS11

84.236

100

0.842

Multiple sequence alignment