Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AKN90_RS04515 | Genome accession | NZ_CP012363 |
| Coordinates | 970448..970753 (+) | Length | 101 a.a. |
| NCBI ID | WP_053101175.1 | Uniprot ID | A0A0K1XEZ4 |
| Organism | Thiopseudomonas alkaliphila strain E1086 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 965448..975753
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AKN90_RS04495 (AKN90_04505) | recR | 966389..966988 (-) | 600 | WP_053101183.1 | recombination mediator RecR | - |
| AKN90_RS04500 (AKN90_04510) | - | 967046..967372 (-) | 327 | WP_053101181.1 | YbaB/EbfC family nucleoid-associated protein | - |
| AKN90_RS04505 (AKN90_04515) | dnaX | 967396..969354 (-) | 1959 | WP_053105969.1 | DNA polymerase III subunit gamma/tau | - |
| AKN90_RS04510 (AKN90_04520) | - | 969678..970358 (-) | 681 | WP_053105123.1 | thiopurine S-methyltransferase | - |
| AKN90_RS04515 (AKN90_04525) | comEA | 970448..970753 (+) | 306 | WP_053101175.1 | ComEA family DNA-binding protein | Machinery gene |
| AKN90_RS04520 (AKN90_04530) | - | 970765..971058 (-) | 294 | WP_053101173.1 | YcgL domain-containing protein | - |
| AKN90_RS04525 (AKN90_04535) | rnd | 971058..972182 (-) | 1125 | WP_053105970.1 | ribonuclease D | - |
| AKN90_RS04530 (AKN90_04540) | - | 972511..973152 (+) | 642 | WP_053105971.1 | response regulator | - |
| AKN90_RS04535 (AKN90_04545) | uvrC | 973154..974980 (+) | 1827 | WP_053106629.1 | excinuclease ABC subunit UvrC | - |
| AKN90_RS04540 (AKN90_04550) | pgsA | 975003..975566 (+) | 564 | WP_053105121.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 10831.50 Da Isoelectric Point: 5.6651
>NTDB_id=153806 AKN90_RS04515 WP_053101175.1 970448..970753(+) (comEA) [Thiopseudomonas alkaliphila strain E1086]
MKRLIQALLCSTLLGLTPALVLAEEPAPAVANTQQQTQTINLNQADAETLAKHLSGIGMAKAQAIIAYREANGPFEHIDE
LLEVKGIGNATLEKNRDKLSL
MKRLIQALLCSTLLGLTPALVLAEEPAPAVANTQQQTQTINLNQADAETLAKHLSGIGMAKAQAIIAYREANGPFEHIDE
LLEVKGIGNATLEKNRDKLSL
Nucleotide
Download Length: 306 bp
>NTDB_id=153806 AKN90_RS04515 WP_053101175.1 970448..970753(+) (comEA) [Thiopseudomonas alkaliphila strain E1086]
ATGAAACGATTAATCCAAGCTCTGCTCTGCAGCACTCTACTAGGTTTAACCCCTGCATTAGTACTTGCCGAGGAGCCAGC
TCCTGCTGTAGCTAACACTCAACAACAAACTCAAACTATTAACCTAAATCAAGCTGATGCAGAAACCTTAGCCAAACACT
TATCTGGCATTGGTATGGCCAAAGCCCAAGCCATTATTGCTTATCGAGAAGCTAACGGGCCCTTTGAGCACATTGATGAG
TTACTAGAAGTCAAAGGTATCGGTAACGCCACACTGGAAAAAAATCGCGATAAATTATCGCTCTAA
ATGAAACGATTAATCCAAGCTCTGCTCTGCAGCACTCTACTAGGTTTAACCCCTGCATTAGTACTTGCCGAGGAGCCAGC
TCCTGCTGTAGCTAACACTCAACAACAAACTCAAACTATTAACCTAAATCAAGCTGATGCAGAAACCTTAGCCAAACACT
TATCTGGCATTGGTATGGCCAAAGCCCAAGCCATTATTGCTTATCGAGAAGCTAACGGGCCCTTTGAGCACATTGATGAG
TTACTAGAAGTCAAAGGTATCGGTAACGCCACACTGGAAAAAAATCGCGATAAATTATCGCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50.495 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50.495 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
44.037 |
100 |
0.475 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
41.593 |
100 |
0.465 |
| comEA | Legionella pneumophila str. Paris |
43.878 |
97.03 |
0.426 |
| comEA | Legionella pneumophila strain ERS1305867 |
43.878 |
97.03 |
0.426 |