Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AKN91_RS10055 | Genome accession | NZ_CP012362 |
| Coordinates | 2103659..2103964 (-) | Length | 101 a.a. |
| NCBI ID | WP_053101175.1 | Uniprot ID | A0A0K1XEZ4 |
| Organism | Thiopseudomonas alkaliphila strain D3318 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2098659..2108964
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AKN91_RS10030 (AKN91_10030) | pgsA | 2098846..2099409 (-) | 564 | WP_053105121.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| AKN91_RS10035 (AKN91_10035) | uvrC | 2099432..2101258 (-) | 1827 | WP_053106629.1 | excinuclease ABC subunit UvrC | - |
| AKN91_RS10040 (AKN91_10040) | - | 2101260..2101901 (-) | 642 | WP_053101169.1 | response regulator | - |
| AKN91_RS10045 (AKN91_10045) | rnd | 2102230..2103354 (+) | 1125 | WP_053109965.1 | ribonuclease D | - |
| AKN91_RS10050 (AKN91_10050) | - | 2103354..2103647 (+) | 294 | WP_053101173.1 | YcgL domain-containing protein | - |
| AKN91_RS10055 (AKN91_10055) | comEA | 2103659..2103964 (-) | 306 | WP_053101175.1 | ComEA family DNA-binding protein | Machinery gene |
| AKN91_RS10060 (AKN91_10060) | - | 2104054..2104734 (+) | 681 | WP_053105123.1 | thiopurine S-methyltransferase | - |
| AKN91_RS10065 (AKN91_10065) | dnaX | 2105058..2107004 (+) | 1947 | WP_053109967.1 | DNA polymerase III subunit gamma/tau | - |
| AKN91_RS10070 (AKN91_10070) | - | 2107028..2107354 (+) | 327 | WP_053101181.1 | YbaB/EbfC family nucleoid-associated protein | - |
| AKN91_RS10075 (AKN91_10075) | recR | 2107412..2108011 (+) | 600 | WP_053101183.1 | recombination mediator RecR | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 10831.50 Da Isoelectric Point: 5.6651
>NTDB_id=153801 AKN91_RS10055 WP_053101175.1 2103659..2103964(-) (comEA) [Thiopseudomonas alkaliphila strain D3318]
MKRLIQALLCSTLLGLTPALVLAEEPAPAVANTQQQTQTINLNQADAETLAKHLSGIGMAKAQAIIAYREANGPFEHIDE
LLEVKGIGNATLEKNRDKLSL
MKRLIQALLCSTLLGLTPALVLAEEPAPAVANTQQQTQTINLNQADAETLAKHLSGIGMAKAQAIIAYREANGPFEHIDE
LLEVKGIGNATLEKNRDKLSL
Nucleotide
Download Length: 306 bp
>NTDB_id=153801 AKN91_RS10055 WP_053101175.1 2103659..2103964(-) (comEA) [Thiopseudomonas alkaliphila strain D3318]
ATGAAACGATTAATCCAAGCTCTGCTCTGCAGCACTCTACTAGGTTTAACCCCTGCATTAGTACTTGCCGAGGAGCCAGC
TCCTGCTGTAGCTAACACTCAACAACAAACTCAAACTATTAACCTAAATCAAGCTGATGCAGAAACCTTAGCCAAACACT
TATCTGGCATTGGTATGGCCAAAGCCCAAGCCATTATTGCTTATCGAGAAGCTAACGGGCCCTTTGAGCACATTGATGAG
TTACTAGAAGTCAAAGGTATCGGTAACGCCACACTGGAAAAAAATCGCGATAAATTATCGCTCTAA
ATGAAACGATTAATCCAAGCTCTGCTCTGCAGCACTCTACTAGGTTTAACCCCTGCATTAGTACTTGCCGAGGAGCCAGC
TCCTGCTGTAGCTAACACTCAACAACAAACTCAAACTATTAACCTAAATCAAGCTGATGCAGAAACCTTAGCCAAACACT
TATCTGGCATTGGTATGGCCAAAGCCCAAGCCATTATTGCTTATCGAGAAGCTAACGGGCCCTTTGAGCACATTGATGAG
TTACTAGAAGTCAAAGGTATCGGTAACGCCACACTGGAAAAAAATCGCGATAAATTATCGCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50.495 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50.495 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
44.037 |
100 |
0.475 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
41.593 |
100 |
0.465 |
| comEA | Legionella pneumophila str. Paris |
43.878 |
97.03 |
0.426 |
| comEA | Legionella pneumophila strain ERS1305867 |
43.878 |
97.03 |
0.426 |