Detailed information NTG0153612

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: AKJ11_RS13230
• Genome accession: NZ_CP012343
• Coordinates: 2843383..2845533 (+)
• Length: 716 a.a.
• NCBI ID: WP_060684278.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain ZS2058
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 2838383..2850533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AKJ11_RS13200 (AKJ11_13175)	-	2838808..2839980 (+)	1173	WP_223843867.1	sensor histidine kinase	-
AKJ11_RS13205 (AKJ11_13180)	-	2839981..2840724 (+)	744	WP_011100999.1	LytTR family transcriptional regulator DNA-binding domain-containing protein	-
AKJ11_RS13210 (AKJ11_13185)	-	2840843..2841586 (+)	744	WP_003641982.1	response regulator transcription factor	-
AKJ11_RS13215 (AKJ11_13190)	-	2841891..2842664 (-)	774	WP_003646470.1	CPBP family intramembrane glutamic endopeptidase	-
AKJ11_RS13220 (AKJ11_13195)	plnF	2842763..2842921 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
AKJ11_RS13225 (AKJ11_13200)	plnE	2842946..2843116 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
AKJ11_RS13230 (AKJ11_13205)	comA	2843383..2845533 (+)	2151	WP_060684278.1	peptide cleavage/export ABC transporter	Regulator
AKJ11_RS13235 (AKJ11_13210)	-	2845549..2846925 (+)	1377	WP_060684279.1	HlyD family secretion protein	-
AKJ11_RS13240 (AKJ11_13215)	-	2847160..2847705 (+)	546	WP_003641989.1	CPBP family intramembrane glutamic endopeptidase	-
AKJ11_RS13245 (AKJ11_13220)	-	2847772..2848440 (+)	669	WP_003641990.1	CPBP family intramembrane glutamic endopeptidase	-
AKJ11_RS13250 (AKJ11_13225)	-	2848527..2849207 (+)	681	WP_003641991.1	CPBP family intramembrane glutamic endopeptidase	-
AKJ11_RS13255 (AKJ11_13230)	-	2849301..2849987 (+)	687	WP_060684280.1	CPBP family intramembrane glutamic endopeptidase	-
AKJ11_RS13260 (AKJ11_13235)	-	2850125..2850328 (+)	204	WP_060684281.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79918.64 Da
• Isoelectric Point: 6.6531

>NTDB_id=153612 AKJ11_RS13230 WP_060684278.1 2843383..2845533(+) (comA) [Lactiplantibacillus plantarum strain ZS2058]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFEVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAILTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=153612 AKJ11_RS13230 WP_060684278.1 2843383..2845533(+) (comA) [Lactiplantibacillus plantarum strain ZS2058]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGAGGTACAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGCCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTGACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCGAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAATGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATTGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	59.046	99.581	0.588
comA	Streptococcus pneumoniae Rx1	58.766	99.581	0.585
comA	Streptococcus pneumoniae D39	58.766	99.581	0.585
comA	Streptococcus pneumoniae R6	58.766	99.581	0.585
comA	Streptococcus pneumoniae TIGR4	58.626	99.581	0.584
comA	Streptococcus mitis SK321	58.485	99.581	0.582
comA	Streptococcus gordonii str. Challis substr. CH1	57.242	100	0.574
comA/nlmT	Streptococcus mutans UA159	54.596	100	0.547