Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | lpt_RS05050 | Genome accession | NZ_CP012019 |
| Coordinates | 1121129..1121728 (+) | Length | 199 a.a. |
| NCBI ID | WP_011215096.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila strain Toronto-20052 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1116129..1126728
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| lpt_RS05035 (lpt_05020) | ravI | 1118075..1119082 (-) | 1008 | WP_027266406.1 | Dot/Icm T4SS effector RavI | - |
| lpt_RS05040 (lpt_05025) | pilM | 1119499..1120563 (+) | 1065 | WP_027266405.1 | type IV pilus assembly protein PilM | Machinery gene |
| lpt_RS05045 (lpt_05030) | pilN | 1120567..1121115 (+) | 549 | WP_010946663.1 | PilN domain-containing protein | Machinery gene |
| lpt_RS05050 (lpt_05035) | pilO | 1121129..1121728 (+) | 600 | WP_011215096.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| lpt_RS05055 (lpt_05040) | pilP | 1121725..1122309 (+) | 585 | WP_027266404.1 | pilus assembly protein PilP | Machinery gene |
| lpt_RS05060 (lpt_05045) | pilQ | 1122313..1124409 (+) | 2097 | WP_061483600.1 | type IV pilus secretin PilQ | Machinery gene |
| lpt_RS05065 (lpt_05050) | aroK | 1124856..1125383 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| lpt_RS05070 (lpt_05055) | aroB | 1125370..1126479 (+) | 1110 | WP_013101269.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22482.18 Da Isoelectric Point: 5.3369
>NTDB_id=150380 lpt_RS05050 WP_011215096.1 1121129..1121728(+) (pilO) [Legionella pneumophila subsp. pneumophila strain Toronto-20052]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=150380 lpt_RS05050 WP_011215096.1 1121129..1121728(+) (pilO) [Legionella pneumophila subsp. pneumophila strain Toronto-20052]
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCAAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTGGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCAAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTGGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
98.995 |
100 |
0.99 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
37.696 |
95.98 |
0.362 |