Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BEH_RS24010 | Genome accession | NZ_CP011974 |
| Coordinates | 4849635..4850126 (-) | Length | 163 a.a. |
| NCBI ID | WP_019394676.1 | Uniprot ID | - |
| Organism | Priestia filamentosa strain Hbe603 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4844635..4855126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEH_RS23990 (BEH_24025) | rplI | 4845729..4846175 (-) | 447 | WP_019394680.1 | 50S ribosomal protein L9 | - |
| BEH_RS23995 (BEH_24030) | - | 4846172..4848145 (-) | 1974 | WP_019394679.1 | DHH family phosphoesterase | - |
| BEH_RS24000 (BEH_24035) | - | 4848235..4849170 (-) | 936 | WP_048896894.1 | YybS family protein | - |
| BEH_RS24005 (BEH_24040) | rpsR | 4849337..4849579 (-) | 243 | WP_019394677.1 | 30S ribosomal protein S18 | - |
| BEH_RS24010 (BEH_24045) | ssbA | 4849635..4850126 (-) | 492 | WP_019394676.1 | single-stranded DNA-binding protein | Machinery gene |
| BEH_RS24015 (BEH_24050) | rpsF | 4850160..4850447 (-) | 288 | WP_019394675.1 | 30S ribosomal protein S6 | - |
| BEH_RS24020 (BEH_24055) | ychF | 4850703..4851803 (-) | 1101 | WP_040060454.1 | redox-regulated ATPase YchF | - |
| BEH_RS24025 (BEH_24060) | - | 4851924..4853927 (-) | 2004 | WP_040060456.1 | molybdopterin-dependent oxidoreductase | - |
| BEH_RS24030 (BEH_24065) | - | 4853998..4854198 (-) | 201 | WP_040060458.1 | DUF951 domain-containing protein | - |
| BEH_RS24035 (BEH_24070) | - | 4854218..4855093 (-) | 876 | WP_019394671.1 | mechanosensitive ion channel family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18039.62 Da Isoelectric Point: 4.6035
>NTDB_id=149864 BEH_RS24010 WP_019394676.1 4849635..4850126(-) (ssbA) [Priestia filamentosa strain Hbe603]
MINRVILVGRLTKDPELRYTPNGVAVATFSLAVNRTFTNQQGDREADFINCVVWRRQAENVANFLKKGSLAGVDGRIQTR
SYDNQEGRRVYVTEVVGDNVQFLEPKSGSGGGNSNNNFQSSPNQGSPFGQDQNRNNQGYTRVDDDPFSSNGDTIDISDDD
LPF
MINRVILVGRLTKDPELRYTPNGVAVATFSLAVNRTFTNQQGDREADFINCVVWRRQAENVANFLKKGSLAGVDGRIQTR
SYDNQEGRRVYVTEVVGDNVQFLEPKSGSGGGNSNNNFQSSPNQGSPFGQDQNRNNQGYTRVDDDPFSSNGDTIDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=149864 BEH_RS24010 WP_019394676.1 4849635..4850126(-) (ssbA) [Priestia filamentosa strain Hbe603]
ATGATCAATCGCGTTATTCTTGTTGGCCGTTTAACGAAAGACCCTGAATTACGCTATACGCCAAATGGAGTCGCTGTAGC
AACTTTTAGTTTGGCAGTTAATCGCACATTTACAAATCAGCAAGGCGACCGTGAAGCTGACTTCATTAATTGCGTCGTTT
GGCGTCGTCAAGCTGAGAACGTAGCAAACTTCTTGAAGAAAGGAAGTTTAGCTGGTGTTGATGGCCGAATTCAAACTCGT
AGCTATGACAATCAAGAAGGCCGTCGTGTCTATGTCACTGAAGTGGTAGGAGACAACGTTCAATTTCTTGAGCCGAAGAG
CGGAAGCGGTGGCGGAAATTCTAATAACAATTTCCAAAGCTCTCCAAATCAAGGTTCTCCATTTGGACAAGATCAGAACC
GCAACAATCAAGGATATACACGTGTAGATGATGATCCGTTCTCAAGCAACGGAGATACAATTGACATTTCAGATGATGAT
CTGCCATTCTAA
ATGATCAATCGCGTTATTCTTGTTGGCCGTTTAACGAAAGACCCTGAATTACGCTATACGCCAAATGGAGTCGCTGTAGC
AACTTTTAGTTTGGCAGTTAATCGCACATTTACAAATCAGCAAGGCGACCGTGAAGCTGACTTCATTAATTGCGTCGTTT
GGCGTCGTCAAGCTGAGAACGTAGCAAACTTCTTGAAGAAAGGAAGTTTAGCTGGTGTTGATGGCCGAATTCAAACTCGT
AGCTATGACAATCAAGAAGGCCGTCGTGTCTATGTCACTGAAGTGGTAGGAGACAACGTTCAATTTCTTGAGCCGAAGAG
CGGAAGCGGTGGCGGAAATTCTAATAACAATTTCCAAAGCTCTCCAAATCAAGGTTCTCCATTTGGACAAGATCAGAACC
GCAACAATCAAGGATATACACGTGTAGATGATGATCCGTTCTCAAGCAACGGAGATACAATTGACATTTCAGATGATGAT
CTGCCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
67.052 |
100 |
0.712 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60 |
100 |
0.626 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
63.208 |
65.031 |
0.411 |
| ssb | Glaesserella parasuis strain SC1401 |
36.158 |
100 |
0.393 |
| ssb | Vibrio cholerae strain A1552 |
33.714 |
100 |
0.362 |