Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | BEH_RS23265 | Genome accession | NZ_CP011974 |
| Coordinates | 4693616..4693951 (-) | Length | 111 a.a. |
| NCBI ID | WP_019394825.1 | Uniprot ID | A0A1X7FS11 |
| Organism | Priestia filamentosa strain Hbe603 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4688616..4698951
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEH_RS23250 (BEH_23285) | - | 4689795..4691138 (-) | 1344 | WP_046218079.1 | UDP-glucose dehydrogenase family protein | - |
| BEH_RS23255 (BEH_23290) | galU | 4691261..4692142 (-) | 882 | WP_040060306.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| BEH_RS23260 (BEH_23295) | - | 4692435..4693475 (+) | 1041 | WP_040060307.1 | LysM peptidoglycan-binding domain-containing protein | - |
| BEH_RS23265 (BEH_23300) | ssbB | 4693616..4693951 (-) | 336 | WP_019394825.1 | single-stranded DNA-binding protein | Machinery gene |
| BEH_RS23270 (BEH_23305) | - | 4694067..4694483 (+) | 417 | WP_019394824.1 | YwpF family protein | - |
| BEH_RS23275 (BEH_23310) | - | 4694980..4695381 (+) | 402 | WP_019394822.1 | helix-turn-helix domain-containing protein | - |
| BEH_RS23280 (BEH_23315) | - | 4695432..4695809 (-) | 378 | WP_040060308.1 | hypothetical protein | - |
| BEH_RS23285 (BEH_23320) | fabZ | 4695930..4696367 (-) | 438 | WP_019394820.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| BEH_RS23290 (BEH_23325) | - | 4696382..4696651 (-) | 270 | WP_019394819.1 | DNA-directed RNA polymerase subunit beta | - |
| BEH_RS23295 (BEH_23330) | - | 4696683..4697507 (-) | 825 | WP_046218036.1 | flagellar hook-basal body protein | - |
| BEH_RS23300 (BEH_23335) | - | 4697523..4698344 (-) | 822 | WP_046218037.1 | flagellar hook-basal body protein | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12681.49 Da Isoelectric Point: 10.3634
>NTDB_id=149859 BEH_RS23265 WP_019394825.1 4693616..4693951(-) (ssbB) [Priestia filamentosa strain Hbe603]
MFNQVTLVGRLARVPDLRYTTDGVAYTHLVLAVQRSFRNQNGEFDADFVSVTVWRKNAENTVQYCEKGTLIGITGRVQTR
QYERDGGKKVFLTEIIADRIRFLQRKIGAPS
MFNQVTLVGRLARVPDLRYTTDGVAYTHLVLAVQRSFRNQNGEFDADFVSVTVWRKNAENTVQYCEKGTLIGITGRVQTR
QYERDGGKKVFLTEIIADRIRFLQRKIGAPS
Nucleotide
Download Length: 336 bp
>NTDB_id=149859 BEH_RS23265 WP_019394825.1 4693616..4693951(-) (ssbB) [Priestia filamentosa strain Hbe603]
TTGTTTAATCAAGTTACGTTAGTTGGTCGTCTTGCAAGAGTACCGGACCTTCGTTACACAACAGACGGAGTTGCTTATAC
TCATTTAGTATTAGCGGTTCAGCGCTCTTTTCGCAACCAAAACGGAGAGTTTGACGCTGACTTTGTTTCTGTTACTGTAT
GGAGAAAAAATGCAGAAAATACAGTTCAGTACTGTGAAAAAGGAACTTTAATTGGAATCACAGGTCGAGTACAAACCCGT
CAGTATGAACGTGATGGCGGTAAAAAGGTATTTTTAACGGAAATCATAGCTGACCGGATTCGCTTTTTGCAACGTAAAAT
AGGAGCACCATCTTAG
TTGTTTAATCAAGTTACGTTAGTTGGTCGTCTTGCAAGAGTACCGGACCTTCGTTACACAACAGACGGAGTTGCTTATAC
TCATTTAGTATTAGCGGTTCAGCGCTCTTTTCGCAACCAAAACGGAGAGTTTGACGCTGACTTTGTTTCTGTTACTGTAT
GGAGAAAAAATGCAGAAAATACAGTTCAGTACTGTGAAAAAGGAACTTTAATTGGAATCACAGGTCGAGTACAAACCCGT
CAGTATGAACGTGATGGCGGTAAAAAGGTATTTTTAACGGAAATCATAGCTGACCGGATTCGCTTTTTGCAACGTAAAAT
AGGAGCACCATCTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
95.495 |
0.55 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
49.057 |
95.495 |
0.468 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.226 |
95.495 |
0.441 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.453 |
95.495 |
0.405 |
| ssbA | Streptococcus mutans UA159 |
39.623 |
95.495 |
0.378 |