Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACJ69_RS15565 | Genome accession | NZ_CP011863 |
| Coordinates | 3220052..3220582 (-) | Length | 176 a.a. |
| NCBI ID | WP_029740211.1 | Uniprot ID | A0A263VT06 |
| Organism | Enterobacter asburiae strain ATCC 35953 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 3201150..3219836 | 3220052..3220582 | flank | 216 |
Gene organization within MGE regions
Location: 3201150..3220582
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ69_RS15485 (ACJ69_15480) | - | 3201150..3202514 (-) | 1365 | WP_059347288.1 | anti-phage deoxyguanosine triphosphatase | - |
| ACJ69_RS15490 (ACJ69_15485) | - | 3203042..3203608 (+) | 567 | WP_081051437.1 | DNA adenine methylase | - |
| ACJ69_RS15495 (ACJ69_15490) | - | 3203605..3204450 (+) | 846 | WP_048216955.1 | 8-oxoguanine DNA glycosylase | - |
| ACJ69_RS24340 | - | 3204394..3205068 (-) | 675 | WP_223862018.1 | dehydrogenase | - |
| ACJ69_RS15500 (ACJ69_15495) | - | 3205046..3205651 (-) | 606 | WP_048216956.1 | 7-cyano-7-deazaguanine synthase | - |
| ACJ69_RS15505 (ACJ69_15500) | - | 3205648..3206889 (-) | 1242 | WP_081051438.1 | PfkB family carbohydrate kinase | - |
| ACJ69_RS15510 (ACJ69_15505) | - | 3206886..3207218 (-) | 333 | WP_048216957.1 | hypothetical protein | - |
| ACJ69_RS15515 (ACJ69_15510) | - | 3207578..3208183 (+) | 606 | WP_048216958.1 | hypothetical protein | - |
| ACJ69_RS15520 (ACJ69_15515) | - | 3208468..3208710 (-) | 243 | WP_048216959.1 | hypothetical protein | - |
| ACJ69_RS24345 (ACJ69_15520) | - | 3208970..3209435 (+) | 466 | Protein_3083 | tyrosine-type recombinase/integrase | - |
| ACJ69_RS15525 (ACJ69_15525) | - | 3209439..3211565 (+) | 2127 | WP_059347289.1 | ATP-dependent endonuclease | - |
| ACJ69_RS15530 (ACJ69_15530) | - | 3211568..3213259 (+) | 1692 | WP_059347290.1 | UvrD-helicase domain-containing protein | - |
| ACJ69_RS25580 (ACJ69_15535) | - | 3213460..3213879 (-) | 420 | WP_048216962.1 | hypothetical protein | - |
| ACJ69_RS15540 (ACJ69_15540) | - | 3213872..3214819 (-) | 948 | WP_232248556.1 | hypothetical protein | - |
| ACJ69_RS15545 (ACJ69_15545) | - | 3215133..3216113 (-) | 981 | WP_000019402.1 | IS5-like element IS5 family transposase | - |
| ACJ69_RS15550 (ACJ69_15550) | - | 3216154..3217104 (-) | 951 | WP_232248565.1 | hypothetical protein | - |
| ACJ69_RS15555 (ACJ69_15555) | - | 3217097..3218659 (-) | 1563 | WP_048216964.1 | site-specific integrase | - |
| ACJ69_RS15560 (ACJ69_15560) | - | 3218646..3219893 (-) | 1248 | WP_048216965.1 | site-specific integrase | - |
| ACJ69_RS15565 (ACJ69_15565) | ssb | 3220052..3220582 (-) | 531 | WP_029740211.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18792.81 Da Isoelectric Point: 5.2456
>NTDB_id=149120 ACJ69_RS15565 WP_029740211.1 3220052..3220582(-) (ssb) [Enterobacter asburiae strain ATCC 35953]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQSQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQSQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=149120 ACJ69_RS15565 WP_029740211.1 3220052..3220582(-) (ssb) [Enterobacter asburiae strain ATCC 35953]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGTGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGGCCGGCGCTGAGAAGTACACCACAGAAGTCGTGGTCAACGTGGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGTGCACCGGCAGGTGGCGGCCAGAGCCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCGCAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCTCCG
GCGCCGTCTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTAG
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGTGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGGCCGGCGCTGAGAAGTACACCACAGAAGTCGTGGTCAACGTGGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGTGCACCGGCAGGTGGCGGCCAGAGCCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCGCAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCTCCG
GCGCCGTCTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.773 |
| ssb | Glaesserella parasuis strain SC1401 |
56.216 |
100 |
0.591 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.364 |