Detailed information NTG0149007

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: AB691_RS03010
• Genome accession: NZ_CP011854
• Coordinates: 656998..658062 (+)
• Length: 354 a.a.
• NCBI ID: WP_048328486.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain SLG510A3-8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 651998..663062

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB691_RS02995 (AB691_0621)	-	652126..652920 (+)	795	WP_048328484.1	thermonuclease family protein	-
AB691_RS03000 (AB691_0622)	-	653062..654330 (+)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
AB691_RS03005 (AB691_0623)	-	654395..656818 (-)	2424	WP_045159369.1	penicillin-binding protein 1A	-
AB691_RS03010 (AB691_0624)	comM	656998..658062 (+)	1065	WP_048328486.1	pilus assembly protein PilM	Machinery gene
AB691_RS03015 (AB691_0625)	pilN	658062..658634 (+)	573	WP_048328488.1	type 4a pilus biogenesis protein PilN	-
AB691_RS03020	pilO	658631..659257 (+)	627	WP_048328490.1	type 4a pilus biogenesis protein PilO	-
AB691_RS03025 (AB691_0628)	pilP	659254..659781 (+)	528	WP_045159373.1	type 4a pilus biogenesis lipoprotein PilP	-
AB691_RS03030 (AB691_0629)	pilQ	659835..661955 (+)	2121	WP_048328492.1	type IV pilus secretin PilQ	Machinery gene
AB691_RS03035 (AB691_0630)	aroK	661959..662504 (+)	546	WP_017244294.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37760.28 Da
• Isoelectric Point: 4.6880

>NTDB_id=149007 AB691_RS03010 WP_048328486.1 656998..658062(+) (comM) [Stutzerimonas stutzeri strain SLG510A3-8]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTGHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=149007 AB691_RS03010 WP_048328486.1 656998..658062(+) (comM) [Stutzerimonas stutzeri strain SLG510A3-8]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCGCCGAATGCCGTCGTCGAAAAGAACA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACAAAGATGATTGAAATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAACCAGCT
CAAGATCGAGGCGGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAAGTTCTCCTCGCCGCTTGCCGTAAGGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGACTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTATGGGTTGCTCGCTTCACAGTTGGG
TACAGGGCACGGCGAGCTGACCGTTGCCGTTGTCGACATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAGCAGCTGTTCGGTGGTCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGCGGTCTCCCAGATGACTACGACAGTGAAGTGCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAACAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGATTGCATCCTGCTCG
CGGGCGGGACGGCCTCCATTCCGGGTCTCGATCACATGATCCAGCAAAAGATCGGAACGCAAACTCTAGTGGCTAATCCC
TTCGCCGATATGGCTTTGAGCAGCAAGGTGAACGCCGGGGCGCTGGCCAGTGATGCGCCTGCATTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463