Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | REIFOR_RS11280 | Genome accession | NZ_CP011797 |
| Coordinates | 2443941..2444255 (+) | Length | 104 a.a. |
| NCBI ID | WP_100257657.1 | Uniprot ID | A0A2K8KRP7 |
| Organism | Reinekea forsetii strain Hel1_31_D35 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2438941..2449255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| REIFOR_RS11260 (REIFOR_02261) | - | 2439298..2440782 (-) | 1485 | WP_100257654.1 | bifunctional 2-methylcitrate dehydratase/aconitate hydratase | - |
| REIFOR_RS11265 (REIFOR_02262) | prpC | 2440805..2441935 (-) | 1131 | WP_100257655.1 | 2-methylcitrate synthase | - |
| REIFOR_RS11270 (REIFOR_02263) | prpB | 2442037..2442909 (-) | 873 | WP_100257656.1 | methylisocitrate lyase | - |
| REIFOR_RS11275 (REIFOR_02264) | - | 2442996..2443634 (-) | 639 | WP_100258764.1 | GntR family transcriptional regulator | - |
| REIFOR_RS11280 (REIFOR_02265) | comEA | 2443941..2444255 (+) | 315 | WP_100257657.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| REIFOR_RS11295 (REIFOR_02268) | - | 2444962..2445543 (-) | 582 | WP_100257658.1 | nitroreductase | - |
| REIFOR_RS11300 (REIFOR_02269) | - | 2445645..2447087 (+) | 1443 | WP_100257659.1 | adenylate/guanylate cyclase domain-containing protein | - |
| REIFOR_RS11305 (REIFOR_02270) | queF | 2447089..2447910 (-) | 822 | WP_100257660.1 | NADPH-dependent 7-cyano-7-deazaguanine reductase QueF | - |
| REIFOR_RS11310 (REIFOR_02271) | - | 2447921..2448691 (-) | 771 | WP_100257661.1 | ABC transporter permease | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 10972.92 Da Isoelectric Point: 4.2985
>NTDB_id=148749 REIFOR_RS11280 WP_100257657.1 2443941..2444255(+) (comEA) [Reinekea forsetii strain Hel1_31_D35]
MKILMSLITLVALLLPSLALAEVSTPDPVSDKGTETVLLYVNINTDSAEKMADLLTGIGLTKAQAIIDFRDANGPFLAIE
DLLLVPGIGAATLDKNRLALRVAN
MKILMSLITLVALLLPSLALAEVSTPDPVSDKGTETVLLYVNINTDSAEKMADLLTGIGLTKAQAIIDFRDANGPFLAIE
DLLLVPGIGAATLDKNRLALRVAN
Nucleotide
Download Length: 315 bp
>NTDB_id=148749 REIFOR_RS11280 WP_100257657.1 2443941..2444255(+) (comEA) [Reinekea forsetii strain Hel1_31_D35]
ATGAAAATATTAATGAGTCTAATCACCTTGGTCGCCCTACTCCTACCTTCCCTTGCACTGGCGGAGGTTTCAACCCCTGA
TCCGGTCAGCGACAAGGGCACTGAAACGGTTCTGCTATATGTCAATATCAATACCGACAGTGCCGAAAAAATGGCTGACC
TGCTCACTGGCATCGGCTTAACCAAAGCGCAGGCTATCATCGACTTTCGCGACGCCAATGGGCCTTTCCTAGCCATTGAA
GATCTATTACTGGTGCCCGGAATTGGTGCCGCCACTCTGGACAAAAATCGTCTGGCATTGCGTGTGGCAAACTGA
ATGAAAATATTAATGAGTCTAATCACCTTGGTCGCCCTACTCCTACCTTCCCTTGCACTGGCGGAGGTTTCAACCCCTGA
TCCGGTCAGCGACAAGGGCACTGAAACGGTTCTGCTATATGTCAATATCAATACCGACAGTGCCGAAAAAATGGCTGACC
TGCTCACTGGCATCGGCTTAACCAAAGCGCAGGCTATCATCGACTTTCGCGACGCCAATGGGCCTTTCCTAGCCATTGAA
GATCTATTACTGGTGCCCGGAATTGGTGCCGCCACTCTGGACAAAAATCGTCTGGCATTGCGTGTGGCAAACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
96.154 |
0.481 |
| comEA | Vibrio cholerae strain A1552 |
50 |
96.154 |
0.481 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.13 |
100 |
0.433 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.617 |
90.385 |
0.394 |
| comEA | Vibrio campbellii strain DS40M4 |
40.426 |
90.385 |
0.365 |