Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | REIFOR_RS01630 | Genome accession | NZ_CP011797 |
| Coordinates | 349291..350418 (+) | Length | 375 a.a. |
| NCBI ID | WP_100255903.1 | Uniprot ID | A0A2K8KQA3 |
| Organism | Reinekea forsetii strain Hel1_31_D35 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 344291..355418
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| REIFOR_RS01605 (REIFOR_00322) | - | 344557..345705 (-) | 1149 | WP_100255899.1 | homoserine O-acetyltransferase | - |
| REIFOR_RS01610 (REIFOR_00323) | - | 345766..346350 (-) | 585 | WP_100255900.1 | YggT family protein | - |
| REIFOR_RS01615 (REIFOR_00324) | proC | 346501..347322 (-) | 822 | WP_100255901.1 | pyrroline-5-carboxylate reductase | - |
| REIFOR_RS01620 (REIFOR_00325) | - | 347346..348032 (-) | 687 | WP_227003735.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| REIFOR_RS01625 (REIFOR_00326) | pilT | 348160..349194 (+) | 1035 | WP_100255902.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| REIFOR_RS01630 (REIFOR_00327) | pilU | 349291..350418 (+) | 1128 | WP_100255903.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| REIFOR_RS01635 (REIFOR_00328) | - | 350497..350685 (+) | 189 | WP_100255904.1 | DUF1289 domain-containing protein | - |
| REIFOR_RS01640 (REIFOR_00329) | - | 350666..350929 (-) | 264 | WP_100255905.1 | hypothetical protein | - |
| REIFOR_RS01645 (REIFOR_00330) | - | 351059..352654 (+) | 1596 | WP_100255906.1 | GMC family oxidoreductase | - |
| REIFOR_RS01650 (REIFOR_00331) | - | 352710..353534 (-) | 825 | WP_100255907.1 | hypothetical protein | - |
| REIFOR_RS01655 (REIFOR_00332) | - | 353826..354446 (+) | 621 | WP_145980208.1 | alpha/beta fold hydrolase | - |
| REIFOR_RS01660 (REIFOR_00333) | - | 354528..355175 (+) | 648 | WP_100255908.1 | MBL fold metallo-hydrolase | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 41979.31 Da Isoelectric Point: 6.8688
>NTDB_id=148736 REIFOR_RS01630 WP_100255903.1 349291..350418(+) (pilU) [Reinekea forsetii strain Hel1_31_D35]
MEFDKLLRLMVEKGASDLFITAGVPPSMKVNGQVIPVTKTPLSPEKTRELVLSVMTDRQRIEFNDTQECNFAVSARGIGR
FRCSAFHQRNLAGMVLRRIETRIPRIEELGLPDVIKKLAMTKRGLLIFVGATGTGKSTSLAAMIGHRNRNSKGHIISIED
PIEFIHQHEGSIVTQREVGIDTDSFEVALKNTLRQAPDVIMIGEVRTRETMEYAMAFAETGHLCLATLHANNANQALDRI
MHFFPHERQRQLWMDLSLNLKAIVAQQLVPTPDGLGRKAVIEVLINTPLVSDHIRKGDVHLLKDLMAKSPELGMQTFDQA
LFKGYSRGELTYEDALAHADSENDLRLMIKLDQETDPHHLSGQAAKLSIQDSDDY
MEFDKLLRLMVEKGASDLFITAGVPPSMKVNGQVIPVTKTPLSPEKTRELVLSVMTDRQRIEFNDTQECNFAVSARGIGR
FRCSAFHQRNLAGMVLRRIETRIPRIEELGLPDVIKKLAMTKRGLLIFVGATGTGKSTSLAAMIGHRNRNSKGHIISIED
PIEFIHQHEGSIVTQREVGIDTDSFEVALKNTLRQAPDVIMIGEVRTRETMEYAMAFAETGHLCLATLHANNANQALDRI
MHFFPHERQRQLWMDLSLNLKAIVAQQLVPTPDGLGRKAVIEVLINTPLVSDHIRKGDVHLLKDLMAKSPELGMQTFDQA
LFKGYSRGELTYEDALAHADSENDLRLMIKLDQETDPHHLSGQAAKLSIQDSDDY
Nucleotide
Download Length: 1128 bp
>NTDB_id=148736 REIFOR_RS01630 WP_100255903.1 349291..350418(+) (pilU) [Reinekea forsetii strain Hel1_31_D35]
ATGGAATTCGACAAGCTGCTCCGCCTGATGGTAGAAAAGGGCGCCTCTGACCTCTTTATAACGGCGGGTGTACCTCCGAG
TATGAAGGTCAATGGCCAGGTGATCCCGGTCACCAAGACCCCGCTCAGTCCTGAAAAAACACGCGAGCTGGTCTTGTCGG
TAATGACCGACCGGCAGCGCATTGAATTCAATGACACCCAAGAGTGCAATTTCGCAGTCTCGGCGCGTGGCATTGGTCGG
TTCCGGTGCAGTGCCTTTCATCAGCGCAACCTCGCCGGTATGGTCTTGCGCCGTATCGAAACACGTATTCCACGGATCGA
AGAATTGGGCCTGCCCGATGTGATTAAAAAGCTGGCCATGACCAAGCGGGGCCTGTTGATCTTTGTCGGGGCAACCGGGA
CCGGCAAGTCGACCAGCCTGGCGGCGATGATCGGGCACCGTAATCGCAACTCCAAGGGTCACATTATTTCCATTGAGGAC
CCGATTGAATTTATACATCAGCACGAAGGCAGCATCGTGACTCAGCGGGAAGTGGGCATCGACACCGACAGCTTTGAAGT
GGCGCTCAAGAACACCCTGCGCCAAGCGCCCGATGTAATTATGATTGGCGAAGTGCGTACGCGCGAAACCATGGAATATG
CGATGGCCTTTGCCGAAACCGGGCACCTCTGTTTGGCAACCCTGCACGCCAATAACGCCAACCAGGCGCTCGATCGGATC
ATGCATTTCTTCCCCCACGAGCGGCAGCGGCAGCTGTGGATGGATCTATCACTCAATCTGAAAGCCATCGTCGCGCAGCA
GTTGGTGCCGACACCGGACGGTCTGGGTCGTAAGGCGGTGATCGAGGTGTTGATCAATACCCCTCTGGTATCCGATCACA
TCCGTAAGGGCGATGTCCATCTGTTAAAAGACCTGATGGCCAAATCTCCCGAGCTAGGCATGCAAACCTTTGATCAGGCA
CTGTTTAAAGGGTACAGTCGCGGGGAACTGACCTATGAGGATGCCCTGGCCCATGCCGATTCCGAAAACGATCTGCGTCT
GATGATCAAATTGGATCAGGAAACCGACCCACATCATTTAAGCGGCCAAGCGGCCAAATTGAGTATTCAGGATTCAGATG
ACTATTAA
ATGGAATTCGACAAGCTGCTCCGCCTGATGGTAGAAAAGGGCGCCTCTGACCTCTTTATAACGGCGGGTGTACCTCCGAG
TATGAAGGTCAATGGCCAGGTGATCCCGGTCACCAAGACCCCGCTCAGTCCTGAAAAAACACGCGAGCTGGTCTTGTCGG
TAATGACCGACCGGCAGCGCATTGAATTCAATGACACCCAAGAGTGCAATTTCGCAGTCTCGGCGCGTGGCATTGGTCGG
TTCCGGTGCAGTGCCTTTCATCAGCGCAACCTCGCCGGTATGGTCTTGCGCCGTATCGAAACACGTATTCCACGGATCGA
AGAATTGGGCCTGCCCGATGTGATTAAAAAGCTGGCCATGACCAAGCGGGGCCTGTTGATCTTTGTCGGGGCAACCGGGA
CCGGCAAGTCGACCAGCCTGGCGGCGATGATCGGGCACCGTAATCGCAACTCCAAGGGTCACATTATTTCCATTGAGGAC
CCGATTGAATTTATACATCAGCACGAAGGCAGCATCGTGACTCAGCGGGAAGTGGGCATCGACACCGACAGCTTTGAAGT
GGCGCTCAAGAACACCCTGCGCCAAGCGCCCGATGTAATTATGATTGGCGAAGTGCGTACGCGCGAAACCATGGAATATG
CGATGGCCTTTGCCGAAACCGGGCACCTCTGTTTGGCAACCCTGCACGCCAATAACGCCAACCAGGCGCTCGATCGGATC
ATGCATTTCTTCCCCCACGAGCGGCAGCGGCAGCTGTGGATGGATCTATCACTCAATCTGAAAGCCATCGTCGCGCAGCA
GTTGGTGCCGACACCGGACGGTCTGGGTCGTAAGGCGGTGATCGAGGTGTTGATCAATACCCCTCTGGTATCCGATCACA
TCCGTAAGGGCGATGTCCATCTGTTAAAAGACCTGATGGCCAAATCTCCCGAGCTAGGCATGCAAACCTTTGATCAGGCA
CTGTTTAAAGGGTACAGTCGCGGGGAACTGACCTATGAGGATGCCCTGGCCCATGCCGATTCCGAAAACGATCTGCGTCT
GATGATCAAATTGGATCAGGAAACCGACCCACATCATTTAAGCGGCCAAGCGGCCAAATTGAGTATTCAGGATTCAGATG
ACTATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
78.61 |
99.733 |
0.784 |
| pilU | Acinetobacter baylyi ADP1 |
64.706 |
95.2 |
0.616 |
| pilU | Vibrio cholerae strain A1552 |
55.405 |
98.667 |
0.547 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.658 |
90.4 |
0.395 |