Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | ABA10_RS12335 | Genome accession | NZ_CP011534 |
| Coordinates | 2407532..2407828 (-) | Length | 98 a.a. |
| NCBI ID | WP_014477332.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain UD1022 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2402532..2412828
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABA10_RS12290 (ABA10_12290) | tasA | 2402941..2403726 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| ABA10_RS12295 (ABA10_12295) | sipW | 2403790..2404362 (-) | 573 | WP_080030740.1 | signal peptidase I SipW | - |
| ABA10_RS12300 (ABA10_12300) | tapA | 2404346..2405107 (-) | 762 | WP_047182870.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ABA10_RS12305 (ABA10_12305) | yqzG | 2405377..2405703 (+) | 327 | WP_047183570.1 | YqzG/YhdC family protein | - |
| ABA10_RS12310 (ABA10_12310) | spoIITA | 2405745..2405924 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ABA10_RS12315 (ABA10_12315) | comGG | 2405996..2406370 (-) | 375 | WP_047182871.1 | ComG operon protein ComGG | Machinery gene |
| ABA10_RS12320 (ABA10_12320) | comGF | 2406371..2406754 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| ABA10_RS12325 (ABA10_12325) | comGE | 2406780..2407127 (-) | 348 | WP_047182872.1 | ComG operon protein 5 | Machinery gene |
| ABA10_RS12330 (ABA10_12330) | comGD | 2407111..2407542 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| ABA10_RS12335 (ABA10_12335) | comGC | 2407532..2407828 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| ABA10_RS12340 (ABA10_12340) | comGB | 2407842..2408879 (-) | 1038 | WP_047182873.1 | comG operon protein ComGB | Machinery gene |
| ABA10_RS12345 (ABA10_12345) | comGA | 2408866..2409936 (-) | 1071 | WP_015483431.1 | competence protein ComGA | Machinery gene |
| ABA10_RS12350 (ABA10_12350) | corA | 2410346..2411299 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| ABA10_RS12355 (ABA10_12355) | yqhB | 2411442..2412770 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10830.69 Da Isoelectric Point: 6.4730
>NTDB_id=146749 ABA10_RS12335 WP_014477332.1 2407532..2407828(-) (comGC) [Bacillus subtilis strain UD1022]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=146749 ABA10_RS12335 WP_014477332.1 2407532..2407828(-) (comGC) [Bacillus subtilis strain UD1022]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATTGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACCG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATTGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACCG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
98.98 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |