Detailed information NTG0146332

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABA45_RS03630
• Genome accession: NZ_CP011494
• Coordinates: 807412..808476 (+)
• Length: 354 a.a.
• NCBI ID: WP_048384364.1
• Uniprot ID: A0A0H4I984
• Organism: Marinobacter psychrophilus strain 20041
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 802412..813476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABA45_RS03615 (ABA45_03615)	rpmE	802813..803037 (+)	225	WP_014869990.1	50S ribosomal protein L31	-
ABA45_RS03620 (ABA45_03620)	-	803287..804552 (+)	1266	WP_048384362.1	malic enzyme-like NAD(P)-binding protein	-
ABA45_RS03625 (ABA45_03625)	-	804681..807218 (-)	2538	WP_048384363.1	penicillin-binding protein 1A	-
ABA45_RS03630 (ABA45_03630)	pilM	807412..808476 (+)	1065	WP_048384364.1	pilus assembly protein PilM	Machinery gene
ABA45_RS03635 (ABA45_03635)	-	808476..809042 (+)	567	WP_048384365.1	PilN domain-containing protein	-
ABA45_RS03640 (ABA45_03640)	-	809039..809650 (+)	612	WP_048384366.1	type 4a pilus biogenesis protein PilO	-
ABA45_RS03645 (ABA45_03645)	-	809653..810225 (+)	573	WP_048384367.1	pilus assembly protein PilP	-
ABA45_RS03650 (ABA45_03650)	pilQ	810225..812342 (+)	2118	WP_048384368.1	type IV pilus secretin PilQ	Machinery gene
ABA45_RS03655 (ABA45_03655)	aroK	812482..813048 (+)	567	WP_014869998.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37889.91 Da
• Isoelectric Point: 4.2174

>NTDB_id=146332 ABA45_RS03630 WP_048384364.1 807412..808476(+) (pilM) [Marinobacter psychrophilus strain 20041]
MFGSFGKKSSGVLGLDISSSSVKLLELSKQGDRFRVESYAVEPLPANAVVEKNITDVEAVGDAIKRVVSKSRSGVKQVAV
AVSGSAVITKVIQMDGGINEFEMEDQIALEADQYIPYPLDEVAIDFEVQGPSEANPDKVDVLIAACRKENVDVRQDALDI
AGLTTKVVDVEAYALERAYQLIESQLNSHGDDLVVAIMDVGATMATLSVIAEGKTVYTREQVFGGKQLTEEIQRRYGLSL
EEAGLAKKQGGLPDDYEAEVLNPFREAVVQQVARAMQFFFGASQYNSVDYVVLAGGTSAIPGLVDMVEEKTGTPTLVANP
FADMAVSSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=146332 ABA45_RS03630 WP_048384364.1 807412..808476(+) (pilM) [Marinobacter psychrophilus strain 20041]
GTGTTTGGATCTTTCGGAAAGAAATCCAGTGGTGTGCTGGGCTTGGACATAAGCTCGAGCTCGGTCAAGCTTTTGGAATT
GTCAAAACAGGGCGATCGCTTTCGGGTTGAAAGCTATGCCGTCGAACCTTTACCTGCGAATGCTGTGGTGGAAAAAAACA
TCACGGATGTCGAAGCCGTAGGTGATGCGATCAAGCGCGTGGTGTCCAAATCCCGCTCTGGCGTCAAGCAAGTAGCCGTT
GCCGTATCCGGTTCCGCGGTGATCACCAAGGTGATCCAGATGGATGGCGGTATCAATGAATTCGAAATGGAAGACCAGAT
CGCCCTGGAGGCAGATCAATACATTCCTTATCCGCTGGATGAAGTCGCGATTGATTTCGAGGTACAAGGTCCCTCTGAAG
CCAATCCGGATAAGGTTGATGTACTGATTGCCGCCTGCCGCAAAGAGAATGTTGATGTGCGCCAAGACGCACTGGACATT
GCCGGACTGACTACCAAAGTGGTTGACGTAGAGGCTTATGCCCTCGAGCGTGCCTATCAACTGATTGAATCGCAATTGAA
CTCCCACGGCGACGATCTGGTCGTGGCGATCATGGATGTGGGCGCCACCATGGCTACGTTGAGCGTGATTGCCGAAGGCA
AAACTGTGTATACCCGCGAACAGGTGTTCGGTGGCAAGCAATTAACTGAAGAAATCCAGCGCCGCTATGGTTTGTCGCTG
GAGGAAGCAGGCCTGGCCAAAAAGCAAGGTGGCTTGCCCGATGATTATGAAGCCGAAGTGCTGAACCCGTTCCGCGAGGC
TGTGGTGCAGCAGGTCGCTCGGGCGATGCAGTTCTTTTTCGGCGCCAGCCAGTACAACTCGGTGGATTATGTGGTTTTGG
CCGGCGGGACCTCGGCAATACCCGGGCTTGTTGACATGGTAGAGGAAAAAACGGGTACGCCCACGCTGGTAGCCAATCCG
TTTGCGGACATGGCTGTTAGCTCGCGGGTCAATGCGTCGGCGTTGAGTAACGATGCTCCTTCGTTGATGATCGCGTGTGG
TCTGGCAATGAGGAGCTTCGACTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A0H4I984

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	52.542	100	0.525
comM	Acinetobacter nosocomialis M2	52.26	100	0.523
comM	Acinetobacter baylyi ADP1	51.695	100	0.517
pilM	Legionella pneumophila strain ERS1305867	45.198	100	0.452