Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   AAX11_RS01550 Genome accession   NZ_CP011379
Coordinates   331838..333337 (+) Length   499 a.a.
NCBI ID   WP_046696078.1    Uniprot ID   A0AAC8PX32
Organism   Moraxella bovoculi strain 33362     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 326838..338337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAX11_RS01535 (AAX11_01535) - 327202..328149 (-) 948 WP_046696075.1 D-2-hydroxyacid dehydrogenase -
  AAX11_RS01540 (AAX11_01540) rapA 328427..331288 (+) 2862 WP_046696076.1 RNA polymerase-associated protein RapA -
  AAX11_RS01545 (AAX11_01545) - 331322..331675 (+) 354 WP_046696077.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase -
  AAX11_RS01550 (AAX11_01550) comM 331838..333337 (+) 1500 WP_046696078.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  AAX11_RS01555 (AAX11_01555) - 333369..334043 (-) 675 WP_046696079.1 phosphoglycolate phosphatase -
  AAX11_RS01560 (AAX11_01560) - 334563..335102 (+) 540 WP_046696080.1 porin family protein -
  AAX11_RS01570 (AAX11_01570) - 335481..336422 (+) 942 WP_046699368.1 polyprenyl synthetase family protein -
  AAX11_RS01575 (AAX11_01575) mutY 336489..337652 (-) 1164 WP_046696082.1 A/G-specific adenine glycosylase -

Sequence

Protein


Download         Length: 499 a.a.        Molecular weight: 53720.40 Da        Isoelectric Point: 8.0278

>NTDB_id=145281 AAX11_RS01550 WP_046696078.1 331838..333337(+) (comM) [Moraxella bovoculi strain 33362]
MSFAKIFTRSVVGLHAPSVLVEVHLSQGMPSLTIVGLPEAAVRESKDRVRSALINSDYDFPSRRLTINLAPADLPKDGSR
LDLPIAMGILAASGQVDESVLDGFEFVGELALNGDLRPVSGALSVARAVKVTGRTLILPKENAAEAARVAGVKVIGADSL
IVVCRHLDVVSGVSNNQADLIALSESVSTTARTSYKLDLSDVKGQYHARRALEIAAAGGHSMLFKGSPGSGKTLMASRLP
SILPPLTDDEALEVASIYSVAGVAYEFGVRPYRQCHHTMSAAALSGGGSRPKPGEISLAHKGVLFLDELPEFDRKTLEVM
RQPIESKEIVISRANAQVTYPAEFQLIAAMNPCPCGYHGDPSNRCRCKPDQVRRYQDKISGPLLDRIDLHIHVPAMPLED
LQNAPQGESSDVVRERVMGARNFALRRQGKANNELSPSEIDTHIPLGATEKQLLTTAQSRLNLSARSYHRVLRVARTIAD
LSGAERVGTSHLAEALSYR

Nucleotide


Download         Length: 1500 bp        

>NTDB_id=145281 AAX11_RS01550 WP_046696078.1 331838..333337(+) (comM) [Moraxella bovoculi strain 33362]
ATGTCATTTGCCAAGATTTTTACTCGCTCTGTGGTTGGCTTGCACGCGCCATCGGTGTTGGTGGAGGTGCATTTATCACA
AGGCATGCCGTCTTTGACCATCGTTGGCTTGCCCGAGGCGGCAGTGCGAGAGAGTAAAGATCGCGTCCGCTCAGCGCTCA
TTAACAGTGATTATGACTTTCCCAGTCGCCGTCTGACCATTAACCTTGCGCCTGCCGATCTACCAAAAGACGGTTCGCGG
TTGGATTTGCCGATAGCGATGGGTATCTTGGCAGCTAGCGGTCAAGTAGACGAAAGTGTGCTTGATGGGTTTGAATTCGT
CGGCGAACTGGCGTTAAATGGCGATCTGCGTCCCGTCTCAGGCGCGTTGTCAGTTGCTCGCGCTGTCAAGGTAACAGGGC
GAACGCTTATCTTACCCAAAGAGAATGCAGCAGAAGCGGCGCGTGTGGCAGGGGTGAAAGTCATCGGTGCGGACAGCTTG
ATTGTGGTATGTCGCCATTTAGATGTGGTAAGCGGTGTTAGCAATAATCAAGCGGATTTAATTGCGCTTAGCGAATCAGT
ATCCACGACAGCGCGGACAAGCTATAAGCTTGATTTGTCCGATGTGAAAGGACAGTATCACGCAAGGCGCGCGCTTGAGA
TCGCTGCGGCGGGCGGGCATTCAATGTTATTCAAGGGATCTCCGGGTTCAGGCAAGACGTTGATGGCAAGCCGTCTGCCG
AGCATCTTGCCGCCATTGACCGACGATGAGGCCTTAGAGGTGGCAAGTATTTATTCGGTGGCGGGTGTCGCTTATGAATT
TGGTGTGCGTCCATATAGACAATGTCATCACACCATGAGTGCGGCAGCCTTGTCTGGAGGGGGTTCACGCCCAAAACCTG
GTGAGATTAGCCTTGCCCATAAAGGCGTTCTCTTCTTAGATGAATTACCCGAGTTCGACCGTAAGACATTGGAGGTCATG
CGTCAGCCGATCGAGTCAAAGGAAATCGTCATCAGCCGTGCTAATGCACAAGTGACCTATCCAGCAGAGTTCCAATTGAT
TGCTGCGATGAACCCCTGTCCATGTGGATATCATGGCGACCCATCCAATCGTTGCCGCTGTAAGCCTGACCAAGTACGCC
GTTATCAAGATAAGATATCAGGACCATTGCTTGATCGCATTGACTTACATATCCATGTCCCTGCCATGCCACTAGAAGAC
TTGCAGAACGCACCACAAGGCGAATCATCGGATGTCGTGCGTGAGCGTGTGATGGGGGCGCGTAATTTTGCGCTAAGGCG
TCAAGGCAAGGCCAATAACGAGCTAAGCCCTAGTGAGATTGATACACATATCCCGCTAGGTGCGACAGAGAAGCAACTGC
TTACCACTGCTCAGTCGCGCCTCAACCTATCGGCACGTAGCTATCACCGAGTGCTAAGAGTGGCACGCACCATCGCTGAT
CTGTCAGGTGCAGAGCGGGTAGGAACATCGCACCTAGCAGAAGCGCTAAGCTATCGCTAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(198-399)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(407-499)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Haemophilus influenzae Rd KW20

50.395

100

0.511
  comM Glaesserella parasuis strain SC1401

50.099

100

0.509
  comM Vibrio campbellii strain DS40M4

49.503

100

0.499
  comM Vibrio cholerae strain A1552

49.503

100

0.499
  comM Legionella pneumophila str. Paris

49.012

100

0.497
  comM Legionella pneumophila strain ERS1305867

49.012

100

0.497
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

44.773

100

0.455

Multiple sequence alignment