Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | bslm_RS11895 | Genome accession | NZ_CP011101 |
| Coordinates | 2403009..2403305 (-) | Length | 98 a.a. |
| NCBI ID | WP_014477332.1 | Uniprot ID | - |
| Organism | Bacillus sp. LM 4-2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2398009..2408305
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| bslm_RS11850 (BsLM_2418) | tasA | 2398416..2399201 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| bslm_RS11855 (BsLM_2419) | - | 2399265..2399837 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| bslm_RS11860 (BsLM_2420) | tapA | 2399821..2400582 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| bslm_RS11865 (BsLM_2421) | - | 2400854..2401180 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| bslm_RS11870 (BsLM_2422) | - | 2401222..2401401 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| bslm_RS11875 (BsLM_2423) | comGG | 2401473..2401847 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| bslm_RS11880 (BsLM_2424) | comGF | 2401848..2402231 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| bslm_RS11885 (BsLM_2425) | comGE | 2402257..2402604 (-) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| bslm_RS11890 (BsLM_2426) | comGD | 2402588..2403019 (-) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| bslm_RS11895 (BsLM_2427) | comGC | 2403009..2403305 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| bslm_RS11900 (BsLM_2428) | comGB | 2403319..2404356 (-) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| bslm_RS11905 (BsLM_2429) | comGA | 2404343..2405413 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| bslm_RS11910 (BsLM_2431) | - | 2405625..2405822 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| bslm_RS11915 (BsLM_2432) | corA | 2405824..2406777 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| bslm_RS11920 (BsLM_2433) | - | 2406920..2408248 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10830.69 Da Isoelectric Point: 6.4730
>NTDB_id=142198 bslm_RS11895 WP_014477332.1 2403009..2403305(-) (comGC) [Bacillus sp. LM 4-2]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=142198 bslm_RS11895 WP_014477332.1 2403009..2403305(-) (comGC) [Bacillus sp. LM 4-2]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACTG
CCTTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACTG
CCTTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
98.98 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |