Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   CUGBS98_RS00810 Genome accession   NZ_CP010875
Coordinates   127215..127970 (+) Length   251 a.a.
NCBI ID   WP_000425370.1    Uniprot ID   A0AAV3JI59
Organism   Streptococcus agalactiae strain CU_GBS_98     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 122215..132970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUGBS98_RS00795 (CUGBS98_00161) - 122650..124200 (-) 1551 WP_000722386.1 ABC transporter substrate-binding protein/permease -
  CUGBS98_RS00800 (CUGBS98_00162) - 124336..126210 (+) 1875 WP_000710500.1 DUF2207 domain-containing protein -
  CUGBS98_RS00805 (CUGBS98_00163) - 126256..127095 (+) 840 WP_000905325.1 undecaprenyl-diphosphate phosphatase -
  CUGBS98_RS00810 (CUGBS98_00164) mecA 127215..127970 (+) 756 WP_000425370.1 adaptor protein MecA Regulator
  CUGBS98_RS00815 (CUGBS98_00165) - 127972..129132 (+) 1161 WP_000612109.1 MraY family glycosyltransferase -
  CUGBS98_RS00820 (CUGBS98_00166) sufC 129297..130067 (+) 771 WP_000114502.1 Fe-S cluster assembly ATPase SufC -
  CUGBS98_RS00825 (CUGBS98_00167) sufD 130104..131366 (+) 1263 WP_000031277.1 Fe-S cluster assembly protein SufD -
  CUGBS98_RS00830 (CUGBS98_00168) - 131368..132600 (+) 1233 WP_000173347.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29028.87 Da        Isoelectric Point: 4.2155

>NTDB_id=140480 CUGBS98_RS00810 WP_000425370.1 127215..127970(+) (mecA) [Streptococcus agalactiae strain CU_GBS_98]
MEMKQISETTLKITISMEDLEDRGMELKDFLIPQEKTEEFFYSVMDELDLPENFKNSGMLSFRVTPKKDRIDVFVTKSEL
SKDLNLEELADLGDISKMSPEDFFKTLEQSMLEKGDTDAHAKLAEIENMMDKATQEVVEENVSEEQAEKEVETIGYVHYV
FDFDNIEAVVRFSQTIDFPIEASELYKNGKGYHMTILLDLENQPSYFANLMYARMLEHANVGTKTRAYLKEHSIQLIHDD
AISKLQMIEMG

Nucleotide


Download         Length: 756 bp        

>NTDB_id=140480 CUGBS98_RS00810 WP_000425370.1 127215..127970(+) (mecA) [Streptococcus agalactiae strain CU_GBS_98]
ATGGAAATGAAACAAATCAGTGAAACAACACTGAAAATTACAATTAGTATGGAAGATTTAGAAGATCGTGGTATGGAGCT
GAAAGATTTCCTAATCCCTCAGGAGAAGACTGAGGAATTTTTCTATTCTGTCATGGATGAATTAGACTTGCCAGAAAACT
TTAAAAATAGTGGTATGTTAAGTTTTCGAGTAACACCTAAAAAAGATCGCATTGATGTTTTTGTTACAAAGTCTGAATTA
AGTAAAGATTTAAATTTAGAAGAATTAGCAGATTTGGGTGACATTTCAAAAATGTCTCCAGAAGACTTTTTTAAAACATT
GGAACAATCGATGTTGGAAAAAGGGGATACGGATGCCCATGCCAAATTAGCAGAAATTGAAAATATGATGGATAAAGCAA
CTCAAGAAGTAGTTGAGGAAAATGTTTCTGAAGAACAAGCTGAAAAGGAAGTAGAAACGATTGGATATGTTCACTATGTC
TTTGATTTTGATAATATTGAAGCTGTAGTTCGATTTTCACAAACGATTGATTTTCCAATAGAAGCTTCTGAACTCTATAA
AAATGGTAAAGGCTATCATATGACAATTTTGCTAGACTTGGAAAACCAACCAAGCTACTTTGCTAATTTGATGTATGCTC
GAATGCTTGAACATGCTAATGTGGGCACAAAAACACGAGCTTACTTGAAAGAGCATAGTATTCAATTGATTCATGATGAT
GCTATTTCAAAATTACAAATGATTGAGATGGGATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-245)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

68.145

98.805

0.673
  mecA Streptococcus thermophilus LMD-9

59.438

99.203

0.59
  mecA Streptococcus thermophilus LMG 18311

58.635

99.203

0.582
  mecA Streptococcus pneumoniae Rx1

46.614

100

0.466
  mecA Streptococcus pneumoniae D39

46.614

100

0.466
  mecA Streptococcus pneumoniae R6

46.614

100

0.466
  mecA Streptococcus pneumoniae TIGR4

46.614

100

0.466

Multiple sequence alignment