Detailed information NTG0139779

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SI82_RS04850
• Genome accession: NZ_CP010783
• Coordinates: 979657..980502 (+)
• Length: 281 a.a.
• NCBI ID: WP_003099573.1
• Uniprot ID: A0A1J0MYY1
• Organism: Streptococcus iniae strain YSFST01-82
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 974657..985502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SI82_RS04825 (SI82_04825)	-	974815..976101 (+)	1287	WP_003099561.1	PTS sugar transporter subunit IIC	-
SI82_RS04830 (SI82_04830)	-	976098..976937 (+)	840	WP_003099563.1	alpha/beta hydrolase	-
SI82_RS04835 (SI82_04835)	ylqF	977407..978261 (+)	855	WP_003099566.1	ribosome biogenesis GTPase YlqF	-
SI82_RS04840 (SI82_04840)	-	978245..979030 (+)	786	WP_003099568.1	ribonuclease HII	-
SI82_RS04845 (SI82_04845)	-	979043..979591 (+)	549	WP_003099570.1	sugar O-acetyltransferase	-
SI82_RS04850 (SI82_04850)	dprA	979657..980502 (+)	846	WP_003099573.1	DNA-processing protein DprA	Machinery gene
SI82_RS04855 (SI82_04855)	topA	980599..982734 (+)	2136	WP_003099575.1	type I DNA topoisomerase	-
SI82_RS04860 (SI82_04860)	-	982828..983712 (-)	885	WP_003099578.1	LysR family transcriptional regulator	-
SI82_RS04865 (SI82_04865)	-	983878..984936 (+)	1059	WP_003099589.1	PTS transporter subunit IIC	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31550.74 Da
• Isoelectric Point: 9.9826

>NTDB_id=139779 SI82_RS04850 WP_003099573.1 979657..980502(+) (dprA) [Streptococcus iniae strain YSFST01-82]
MNNFELYKLKKAGLKNHHILNIIHYSQQTKKSLSLRNMAVVSGTSKPCLFLENYKLLNIKELRVEFKKYPSFSILDKTYP
LALKEIDNPPVLLFYQGNLELLNRHKLAVVGSRKSSAVGNKSVESLIKQLNNQFVIVSGLARGIDTVAHFSSIKQGGETI
AVIGSGLDIYYPKENRRLQEFIAEKHLLLSEYCPKEAPLAHHFPERNRIIAGLSMGVLVAEAKWRSGSLITCRFALDYGR
DIFVVPGAILDKQSQGGNHLIQEGAKLVTKGLDIISEYQFL

Nucleotide

• Length: 846 bp

>NTDB_id=139779 SI82_RS04850 WP_003099573.1 979657..980502(+) (dprA) [Streptococcus iniae strain YSFST01-82]
ATGAATAACTTTGAACTGTATAAATTAAAGAAAGCTGGCCTAAAAAATCATCATATTCTAAATATCATTCATTATAGCCA
GCAAACTAAGAAATCTCTATCACTTAGAAATATGGCTGTTGTTTCAGGAACAAGTAAACCATGTCTGTTTTTAGAAAATT
ACAAGCTGTTAAATATAAAAGAGTTACGAGTAGAATTTAAGAAGTATCCCAGCTTTTCAATTTTAGACAAGACCTATCCC
CTTGCTTTAAAAGAAATTGATAATCCGCCAGTATTATTATTTTATCAAGGAAATTTAGAGCTTTTAAATCGGCATAAATT
AGCAGTGGTAGGGTCAAGGAAATCCTCAGCAGTTGGAAACAAATCTGTTGAATCTCTCATCAAGCAACTTAATAATCAGT
TTGTTATTGTTAGTGGGTTGGCTAGAGGAATTGATACTGTAGCTCATTTTTCGAGCATCAAACAAGGTGGAGAGACTATT
GCTGTTATTGGATCAGGGTTAGACATTTATTATCCTAAGGAAAATAGAAGATTACAGGAGTTTATTGCTGAAAAGCATTT
ATTATTAAGTGAATATTGCCCTAAGGAAGCACCTTTAGCACATCATTTTCCAGAACGAAATCGCATAATTGCAGGCTTAT
CTATGGGAGTTTTAGTGGCAGAAGCCAAATGGCGTTCTGGTAGTCTAATCACTTGTCGCTTTGCACTTGATTACGGTAGG
GATATTTTTGTTGTTCCAGGCGCCATCCTTGACAAACAGTCGCAGGGAGGGAATCACCTCATTCAAGAGGGAGCGAAGCT
TGTTACAAAAGGACTTGACATCATTTCTGAATACCAATTTTTATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

3D structure

• AlphaFold DB: A0A1J0MYY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	66.786	99.644	0.665
dprA/cilB/dalA	Streptococcus mitis SK321	57.5	99.644	0.573
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	56.786	99.644	0.566
dprA	Lactococcus lactis subsp. cremoris KW2	54.643	99.644	0.544